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CXCR5 C-X-C motif chemokine receptor 5 [ Gallus gallus (chicken) ]

Gene ID: 419784, updated on 5-Sep-2025
Official Symbol
CXCR5provided by CGNC
Official Full Name
C-X-C motif chemokine receptor 5provided by CGNC
Primary source
CGNC:51092
See related
Ensembl:ENSGALG00010024801
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
BLR1; CRL1; AvCRL1
Orthologs
human mouse all
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See CXCR5 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 24 NC_052555.1 (5623551..5629631)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 24 NC_052596.1 (5583851..5589933)

Chromosome 24 - NC_052555.1Genomic Context describing neighboring genes Neighboring gene HOATZ cilia and flagella associated protein Neighboring gene microRNA 34c Neighboring gene DEAD-box helicase 6 Neighboring gene BCL9 like Neighboring gene uncharacterized LOC124417380 Neighboring gene uncharacterized LOC124417381

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Molecular cloning of a novel chemokine receptor-like gene from early stage chick embryos. Gupta SK, et al. Biochem Mol Biol Int, 1998 Apr. PMID 9584981
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-X-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in B cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lymph node development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
C-X-C chemokine receptor type 5
Names
Burkitt lymphoma receptor 1, GTP binding protein (chemokine (C-X-C motif) receptor 5)
chemokine (C-X-C motif) receptor 5
chemokine receptor

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305214.2 → NP_001292143.1  C-X-C chemokine receptor type 5

    See identical proteins and their annotated locations for NP_001292143.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000341
    UniProtKB/TrEMBL
    A0A8V1A284, G4U4M4
    Related
    ENSGALP00010037301.1, ENSGALT00010060541.1
    Conserved Domains (1) summary
    pfam00001
    Location:70 → 321
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052555.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5623551..5629631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025143189.3 → XP_024998957.1  C-X-C chemokine receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A284
    Conserved Domains (1) summary
    cd15181
    Location:84 → 362
    7tmA_CXCR5; CXC chemokine receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052596.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5583851..5589933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046932357.1 → XP_046788313.1  C-X-C chemokine receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A284

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001030912.1: Suppressed sequence

    Description
    NM_001030912.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein
Heading Accession and Version

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