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MMP10 matrix metallopeptidase 10 [ Gallus gallus (chicken) ]

Gene ID: 418981, updated on 19-May-2023

Summary

Symbol
MMP10provided by CGNC
Full Name
matrix metallopeptidase 10provided by CGNC
Primary source
CGNC:50887
See related
Ensembl:ENSGALG00010007546
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

See MMP10 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (182313478..182320112)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (182354670..182361303)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene SID1 transmembrane family member 2-like Neighboring gene matrix metallopeptidase 13 Neighboring gene uncharacterized LOC124417346 Neighboring gene matrix metallopeptidase 3 Neighboring gene matrix metallopeptidase 1

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Homology

General protein information

Preferred Names
stromelysin-1
Names
matrix metallopeptidase 10 (stromelysin 2)
matrix metallopeptidase 3 (stromelysin 1, progelatinase)
matrix metalloproteinase 10 (stromelysin 2)
NP_001265018.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001278089.2NP_001265018.1  stromelysin-1 precursor

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000027
    UniProtKB/TrEMBL
    E1C9E0
    Related
    ENSGALP00010009894.1, ENSGALT00010017973.1
    Conserved Domains (4) summary
    cd00094
    Location:306496
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    cd04278
    Location:108265
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
    pfam00413
    Location:108265
    Peptidase_M10; Matrixin
    pfam01471
    Location:2887
    PG_binding_1; Putative peptidoglycan binding domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    182313478..182320112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    182354670..182361303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)