Format

Send to:

Choose Destination

TFDP1 transcription factor Dp-1 [ Gallus gallus (chicken) ]

Gene ID: 418739, updated on 14-Feb-2019

Summary

Symbol
TFDP1provided by CGNC
Full Name
transcription factor Dp-1provided by CGNC
Primary source
CGNC:12621
See related
Ensembl:ENSGALG00000016823
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TFDP3
Orthologs

Genomic context

See TFDP1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (138648961..138690364, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (137304340..137345709, complement)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 1 NC_006088.3 (136646835..136687042, complement)

Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene transmembrane protein 255B Neighboring gene ATPase H+/K+ transporting subunit beta Neighboring gene transmembrane and coiled-coil domains 3 Neighboring gene defective in cullin neddylation 1 domain containing 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Cell cycle, organism-specific biosystem (from KEGG)
    Cell cycle, organism-specific biosystemMitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps known as G1 and G2 phases. Cycli...
  • Cell cycle, organism-specific biosystem (from WikiPathways)
    Cell cycle, organism-specific biosystem(From http://en.wikipedia.org/wiki/Cell_cycle) The cell cycle is the series of events that takes place in a cell leading to its division and duplication (replication). Regulation of the cell cycle in...
  • Cell cycle, conserved biosystem (from KEGG)
    Cell cycle, conserved biosystemMitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps known as G1 and G2 phases. Cycli...
  • G1 to S cell cycle control, organism-specific biosystem (from WikiPathways)
    G1 to S cell cycle control, organism-specific biosystemIn the G1 phase there are two types of DNA damage responses, the p53-dependent and the p53-independent pathways. The p53-dependent responses inhibit CDKs through the up-regulation of genes encoding C...
  • TGF-beta signaling pathway, organism-specific biosystem (from KEGG)
    TGF-beta signaling pathway, organism-specific biosystemThe transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species r...
  • TGF-beta signaling pathway, conserved biosystem (from KEGG)
    TGF-beta signaling pathway, conserved biosystemThe transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species r...

General gene information

Markers

Homology

General protein information

Preferred Names
transcription factor Dp-1
Names
transcription factor Dp family member 3

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006088.5 Reference GRCg6a Primary Assembly

    Range
    138648961..138690364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015277903.2XP_015133389.1  transcription factor Dp-1 isoform X1

    Conserved Domains (3) summary
    cd14458
    Location:199245
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113194
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:201340
    DP; Transcription factor DP
  2. XM_015277904.2XP_015133390.1  transcription factor Dp-1 isoform X2

    UniProtKB/TrEMBL
    F1P3E8
    Related
    ENSGALP00000027109.4, ENSGALT00000027160.6
    Conserved Domains (3) summary
    cd14458
    Location:198244
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113193
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:200339
    DP; Transcription factor DP
  3. XM_015277902.2XP_015133388.1  transcription factor Dp-1 isoform X1

    Conserved Domains (3) summary
    cd14458
    Location:199245
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113194
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:201340
    DP; Transcription factor DP
  4. XM_015277905.2XP_015133391.1  transcription factor Dp-1 isoform X2

    UniProtKB/TrEMBL
    F1P3E8
    Conserved Domains (3) summary
    cd14458
    Location:198244
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113193
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:200339
    DP; Transcription factor DP
  5. XM_004938530.3XP_004938587.1  transcription factor Dp-1 isoform X3

    Conserved Domains (3) summary
    cd14458
    Location:197243
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:111192
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:199338
    DP; Transcription factor DP
Support Center