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UXS1 UDP-glucuronate decarboxylase 1 [ Gallus gallus (chicken) ]

Gene ID: 418728, updated on 17-Aug-2024
Official Symbol
UXS1provided by CGNC
Official Full Name
UDP-glucuronate decarboxylase 1provided by CGNC
Primary source
CGNC:12603
See related
Ensembl:ENSGALG00010015124
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See UXS1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (135539922..135595183, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (135497192..135552448, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106671 Neighboring gene uncharacterized LOC107051985 Neighboring gene C2orf40 homolog Neighboring gene uncharacterized LOC112531517 Neighboring gene uncharacterized LOC107051990

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucuronate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
UDP-glucuronic acid decarboxylase 1
XP_015133409.1
XP_025002423.1
XP_040514065.1
XP_040514066.1
XP_040514067.1
XP_416926.1

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    135539922..135595183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015277923.4 → XP_015133409.1  UDP-glucuronic acid decarboxylase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YSY0
    Conserved Domains (2) summary
    cd05230
    Location:73 → 340
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    pfam11803
    Location:7 → 72
    UXS1_N; UDP-glucuronate decarboxylase N-terminal

  2. XM_416926.8 → XP_416926.1  UDP-glucuronic acid decarboxylase 1 isoform X1

    See identical proteins and their annotated locations for XP_416926.1

    UniProtKB/TrEMBL
    A0A8V0YSY0, E1BV28
    Related
    ENSGALP00010021201.1, ENSGALT00010036436.1
    Conserved Domains (2) summary
    cd05230
    Location:90 → 393
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    pfam11803
    Location:7 → 79
    UXS1_N; UDP-glucuronate decarboxylase N-terminal

  3. XM_025146655.2 → XP_025002423.1  UDP-glucuronic acid decarboxylase 1 isoform X3

    Conserved Domains (1) summary
    cl21454
    Location:1 → 224
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    135497192..135552448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040658132.2 → XP_040514066.1  UDP-glucuronic acid decarboxylase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YSY0
    Conserved Domains (2) summary
    cd05230
    Location:73 → 340
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    pfam11803
    Location:7 → 72
    UXS1_N; UDP-glucuronate decarboxylase N-terminal

  2. XM_040658131.2 → XP_040514065.1  UDP-glucuronic acid decarboxylase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YSY0, E1BV28
    Conserved Domains (2) summary
    cd05230
    Location:90 → 393
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    pfam11803
    Location:7 → 79
    UXS1_N; UDP-glucuronate decarboxylase N-terminal

  3. XM_040658133.1 → XP_040514067.1  UDP-glucuronic acid decarboxylase 1 isoform X3

    Conserved Domains (1) summary
    cl21454
    Location:1 → 224
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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