These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001278076.2 → NP_001265005.2  lysophosphatidic acid phosphatase type 6 isoform 1 precursor

   Status: VALIDATED

   Description

   Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).

   Source sequence(s)

   JAENSK010000019

   Conserved Domains (1) summary

   cd07061
   Location:37 → 367

   HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction

2. NM_001278077.2 → NP_001265006.2  lysophosphatidic acid phosphatase type 6 isoform 2

   Status: VALIDATED

   Description

   Transcript Variant: This variant (2) lacks an alternate exon compared to variant 1, that causes a frameshift. This difference causes translation initiation at a downstream AUG and results in an isoform (2) with a shorter N-terminus, compared to isoform 1.

   Source sequence(s)

   JAENSK010000019

   UniProtKB/TrEMBL

   A0A8V0XZT8

   Related

   ENSGALP00010012224.1, ENSGALT00010021454.1

   Conserved Domains (1) summary

   cd07061
   Location:70 → 141

   HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

   Range

   92577112..92584338 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_015296397.4 → XP_015151883.3  lysophosphatidic acid phosphatase type 6 isoform X1

   Conserved Domains (1) summary

   cd07061
   Location:37 → 368

   HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction

2. XM_046940177.1 → XP_046796133.1  lysophosphatidic acid phosphatase type 6 isoform X2

3. XM_046940179.1 → XP_046796135.1  lysophosphatidic acid phosphatase type 6 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

   Range

   92613170..92620378 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_046907867.1 → XP_046763823.1  lysophosphatidic acid phosphatase type 6 isoform X1

2. XM_046907868.1 → XP_046763824.1  lysophosphatidic acid phosphatase type 6 isoform X2

3. XM_046907869.1 → XP_046763825.1  lysophosphatidic acid phosphatase type 6 isoform X2