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TNFRSF1A TNF receptor superfamily member 1A [ Gallus gallus (chicken) ]

Gene ID: 418325, updated on 3-Dec-2024
Symbol
TNFRSF1Aprovided by CGNC
Full Name
TNF receptor superfamily member 1Aprovided by CGNC
Primary source
CGNC:50736
See related
Ensembl:ENSGALG00010024837
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See TNFRSF1A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (79453628..79466552)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (79639492..79652406)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene spindle and centriole associated protein 1 Neighboring gene tripartite motif containing 45 Neighboring gene V-set domain containing T cell activation inhibitor 1 Neighboring gene CTS telomere maintenance complex component 1 Neighboring gene uncharacterized LOC121109311 Neighboring gene methyltransferase like 16 Neighboring gene DNA polymerase theta

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Alix and ALG-2 are involved in tumor necrosis factor receptor 1-induced cell death. Mahul-Mellier AL, et al. J Biol Chem, 2008 Dec 12. PMID 18936101, Free PMC Article
  2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Alix and ALG-2 are new actors of the TNF-R1 pathway
    Title: Alix and ALG-2 are involved in tumor necrosis factor receptor 1-induced cell death.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tumor necrosis factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
tumor necrosis factor receptor superfamily member 1A
Names
tumor necrosis factor receptor superfamily, member 1A

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030779.2 → NP_001025950.1  tumor necrosis factor receptor superfamily member 1A precursor

    See identical proteins and their annotated locations for NP_001025950.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000017
    UniProtKB/TrEMBL
    A0A8V1A4L2, Q5ZJG1
    Related
    ENSGALP00010037404.1, ENSGALT00010060645.1
    Conserved Domains (2) summary
    cd08313
    Location:331 → 409
    Death_TNFR1; Death domain of Tumor Necrosis Factor Receptor 1
    cd10576
    Location:61 → 188
    TNFRSF1A; Tumor necrosis factor receptor superfamily member 1A (TNFRSF1A), also known as TNFR1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    79453628..79466552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046939773.1 → XP_046795729.1  tumor necrosis factor receptor superfamily member 1A isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U849, A0A8V1A4L2
    Related
    ENSGALP00010037401.1, ENSGALT00010060642.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    79639492..79652406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046907763.1 → XP_046763719.1  tumor necrosis factor receptor superfamily member 1A isoform X1

    UniProtKB/TrEMBL
    A0A8V1A4L2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials