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HIST1H2B5 histone cluster 1, H2B-V (similar to human histone cluster 1, class H2B) [ Gallus gallus (chicken) ]

Gene ID: 417957, updated on 10-Mar-2023

Summary

Official Symbol
HIST1H2B5provided by CGNC
Official Full Name
histone cluster 1, H2B-V (similar to human histone cluster 1, class H2B)provided by CGNC
Primary source
CGNC:50635
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
H2B-V; HIST1H2BN
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Genomic context

See HIST1H2B5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (48211409..48212102)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (48508353..48509046)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene histone cluster 1, H1.11L (similar to human histone cluster 1, class H1 genes) Neighboring gene histone cluster 1, H2A-IV-like 3 (similar to human histone cluster 2, class H2A, member C) Neighboring gene histone H3 Neighboring gene histone H3.2-like

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
histone H2B 5
Names
H2B V
histone H2B (AA 35 - 126)
histone cluster 1, H2bn

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079721.2NP_001073189.1  histone H2B 5

    See identical proteins and their annotated locations for NP_001073189.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/Swiss-Prot
    P02279, P0C1H4
    Conserved Domains (1) summary
    smart00427
    Location:28124
    H2B; Histone H2B

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    48211409..48212102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    48508353..48509046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)