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HIST1H101 histone cluster 1, H1.01 (similar to human histone cluster 1, class H1 genes) [ Gallus gallus (chicken) ]

Gene ID: 417954, updated on 11-Dec-2021

Summary

Official Symbol
HIST1H101provided by CGNC
Official Full Name
histone cluster 1, H1.01 (similar to human histone cluster 1, class H1 genes)provided by CGNC
Primary source
CGNC:50632
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

See HIST1H101 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (48192647..48193306)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 1 NC_052573.1 (48489632..48490291)
104 previous assembly GRCg6a (GCF_000002315.5) 1 NC_006088.5 (48151569..48152228)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (48175690..48176349)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene histone cluster 1, H2A-IV-like 1 (similar to human histone cluster 2, class H2A, member C) Neighboring gene histone cluster 1, H4-IV, germinal H4-like 6 (similar to human histone cluster 1, class H4 genes) Neighboring gene histone cluster 1, H2A-IV-like 2 (similar to human histone cluster 2, class H2A, member C) Neighboring gene histone cluster 1, H2bo Neighboring gene uncharacterized LOC121109319

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables double-stranded DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables nucleosomal DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in chromosome condensation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in negative regulation of DNA recombination IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in nucleosome positioning IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001040642.2NP_001035732.1  histone H1.01

    See identical proteins and their annotated locations for NP_001035732.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/Swiss-Prot
    P08284
    Conserved Domains (1) summary
    cd00073
    Location:35120
    H15; linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, consisting of an octamer of core histones, two full turns of DNA, a linker histone (H1 or H5) and a variable length of linker DNA; H1/H5 are chromatin-associated ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    48192647..48193306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    48489632..48490291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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