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H4C36 H4 clustered histone 36 [ Gallus gallus (chicken) ]

Gene ID: 417946, updated on 17-Aug-2024
Official Symbol
H4C36provided by CGNC
Official Full Name
H4 clustered histone 36provided by CGNC
Primary source
CGNC:50627
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
H1; H4; 4-VI; HIST1H46
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See H4C36 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (48136393..48137061)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (48433171..48433839)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene H2B clustered histone 38 Neighboring gene H3 clustered histone 37 Neighboring gene H4 clustered histone 37 Neighboring gene H2A clustered histone 39

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Nucleotide sequences of two members of the chicken H4 histone-encoding gene family. Nakayama T, et al. Gene, 1991 Dec 15. PMID 1748315
  2. Organization of the chicken histone genes in a major gene cluster and generation of an almost complete set of the core histone protein sequences. Takami Y, et al. DNA Res, 1996 Apr 30. PMID 8804862
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
histone cluster 1, H4-VI, germinal H4 (similar to human histone cluster 1, class H4 genes)
Names
germinal histone H4
histone H4-VI

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037845.2 → NP_001032934.1  histone cluster 1, H4-VI, germinal H4 (similar to human histone cluster 1, class H4 genes)

    See identical proteins and their annotated locations for NP_001032934.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/Swiss-Prot
    P62801, P70081
    Conserved Domains (1) summary
    PLN00035
    Location:1 → 103
    PLN00035; histone H4; Provisional

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    48136393..48137061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    48433171..48433839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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