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NPLOC4 NPL4 homolog, ubiquitin recognition factor [ Gallus gallus (chicken) ]

Gene ID: 417456, updated on 5-Mar-2024

Summary

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Symbol
NPLOC4provided by CGNC
Full Name
NPL4 homolog, ubiquitin recognition factorprovided by CGNC
Primary source
CGNC:3388
See related
Ensembl:ENSGALG00010029515
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (9780812..9808583)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (9380331..9408104)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene oxidoreductase-like domain containing 1 Neighboring gene phosphodiesterase 6G Neighboring gene tetraspanin 10 Neighboring gene uncharacterized LOC123575613 Neighboring gene Fanconi anemia core complex associated protein 100

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear protein localization protein 4 homolog
Names
nuclear protein localization 4 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9780812..9808583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_415704.6 → XP_415704.3  nuclear protein localization protein 4 homolog

    UniProtKB/TrEMBL
    A0A1L1RME9, A0A8V1AMG7
    Related
    ENSGALP00010044033.1, ENSGALT00010071342.1
    Conserved Domains (5) summary
    smart00547
    Location:585 → 607
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:585 → 604
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05020
    Location:106 → 246
    zf-NPL4; NPL4 family, putative zinc binding region
    pfam05021
    Location:250 → 557
    NPL4; NPL4 family
    pfam11543
    Location:6 → 79
    UN_NPL4; Nuclear pore localization protein NPL4

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9380331..9408104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040686515.2 → XP_040542449.1  nuclear protein localization protein 4 homolog

    UniProtKB/TrEMBL
    A0A1L1RME9, A0A8V1AMG7
    Conserved Domains (5) summary
    smart00547
    Location:585 → 607
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:585 → 604
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05020
    Location:106 → 246
    zf-NPL4; NPL4 family, putative zinc binding region
    pfam05021
    Location:250 → 557
    NPL4; NPL4 family
    pfam11543
    Location:6 → 79
    UN_NPL4; Nuclear pore localization protein NPL4
Nucleotide Protein Strain
Heading Accession and Version

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