U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LRSAM1 leucine rich repeat and sterile alpha motif containing 1 [ Gallus gallus (chicken) ]

Gene ID: 417265, updated on 13-Apr-2026
Symbol
LRSAM1provided by CGNC
Full Name
leucine rich repeat and sterile alpha motif containing 1provided by CGNC
Primary source
CGNC:6694
See related
Ensembl:ENSGALG00010027976
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See LRSAM1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
27
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (2204938..2230335, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (1613245..1638653, complement)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene FK506 binding protein 15 Neighboring gene uncharacterized LOC112529973 Neighboring gene small nucleolar RNA SNORA65 Neighboring gene ribosomal protein L12 Neighboring gene sperm-tail PG-rich repeat containing 3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
E3 ubiquitin-protein ligase LRSAM1
XP_015135138.2
XP_015135140.2
XP_040505154.1
XP_040505155.1
XP_040505156.1
XP_040505157.1
XP_040541666.1
XP_040541667.1
XP_040541668.1
XP_040541669.1
XP_040541671.1
XP_040541672.1
XP_040541674.1
XP_415540.4

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2204938..2230335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040649221.2 → XP_040505155.1  E3 ubiquitin-protein ligase LRSAM1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1ABF0
    Conserved Domains (7) summary
    PRK15387
    Location:5 → 222
    PRK15387; type III secretion system effector E3 ubiquitin transferase SspH2
    cd09523
    Location:541 → 605
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:58 → 155
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:33 → 54
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:149 → 168
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:653 → 692
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:232 → 448
    DUF5401; Family of unknown function (DUF5401)

  2. XM_015279654.4 → XP_015135140.2  E3 ubiquitin-protein ligase LRSAM1 isoform X4

    UniProtKB/TrEMBL
    A0A8V1ABF0, A0A8V1AIK9
    Related
    ENSGALP00010041548.1, ENSGALT00010067805.1
    Conserved Domains (5) summary
    cd09523
    Location:540 → 604
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:65 → 181
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:33 → 54
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:652 → 691
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:258 → 474
    DUF5401; Family of unknown function (DUF5401)

  3. XM_415540.8 → XP_415540.4  E3 ubiquitin-protein ligase LRSAM1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ABF0, A0A8V1AGR7
    Related
    ENSGALP00010041552.1, ENSGALT00010067809.1
    Conserved Domains (5) summary
    cd09523
    Location:567 → 631
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:65 → 181
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:33 → 54
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:679 → 718
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:258 → 474
    DUF5401; Family of unknown function (DUF5401)

  4. XM_040649222.2 → XP_040505156.1  E3 ubiquitin-protein ligase LRSAM1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1ABF0
    Conserved Domains (7) summary
    PRK15387
    Location:5 → 222
    PRK15387; type III secretion system effector E3 ubiquitin transferase SspH2
    cd09523
    Location:541 → 605
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:58 → 155
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:33 → 54
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:149 → 168
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:653 → 692
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:232 → 448
    DUF5401; Family of unknown function (DUF5401)

  5. XM_015279652.4 → XP_015135138.2  E3 ubiquitin-protein ligase LRSAM1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ABF0, A0A8V1AGR7
    Related
    ENSGALP00010041550.1, ENSGALT00010067807.1
    Conserved Domains (5) summary
    cd09523
    Location:567 → 631
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:65 → 181
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:33 → 54
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:679 → 718
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:258 → 474
    DUF5401; Family of unknown function (DUF5401)

  6. XM_040649220.2 → XP_040505154.1  E3 ubiquitin-protein ligase LRSAM1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AE80
    Related
    ENSGALP00010041546.1, ENSGALT00010067803.1
    Conserved Domains (5) summary
    cd09523
    Location:554 → 618
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:52 → 168
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:20 → 41
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:666 → 705
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:245 → 461
    DUF5401; Family of unknown function (DUF5401)

  7. XM_040649223.2 → XP_040505157.1  E3 ubiquitin-protein ligase LRSAM1 isoform X5

    Conserved Domains (3) summary
    cd09523
    Location:383 → 447
    SAM_TAL; SAM domain of TAL subfamily
    cd16515
    Location:495 → 534
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:74 → 290
    DUF5401; Family of unknown function (DUF5401)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1613245..1638653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040685735.2 → XP_040541669.1  E3 ubiquitin-protein ligase LRSAM1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1ABF0
    Conserved Domains (7) summary
    PRK15387
    Location:5 → 222
    PRK15387; type III secretion system effector E3 ubiquitin transferase SspH2
    cd09523
    Location:541 → 605
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:58 → 155
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:33 → 54
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:149 → 168
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:653 → 692
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:232 → 448
    DUF5401; Family of unknown function (DUF5401)

  2. XM_040685738.2 → XP_040541672.1  E3 ubiquitin-protein ligase LRSAM1 isoform X4

    UniProtKB/TrEMBL
    A0A8V1ABF0
    Conserved Domains (5) summary
    cd09523
    Location:540 → 604
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:65 → 181
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:33 → 54
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:652 → 691
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:258 → 474
    DUF5401; Family of unknown function (DUF5401)

  3. XM_040685732.2 → XP_040541666.1  E3 ubiquitin-protein ligase LRSAM1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ABF0
    Conserved Domains (5) summary
    cd09523
    Location:567 → 631
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:65 → 181
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:33 → 54
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:679 → 718
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:258 → 474
    DUF5401; Family of unknown function (DUF5401)

  4. XM_040685737.2 → XP_040541671.1  E3 ubiquitin-protein ligase LRSAM1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1ABF0
    Conserved Domains (7) summary
    PRK15387
    Location:5 → 222
    PRK15387; type III secretion system effector E3 ubiquitin transferase SspH2
    cd09523
    Location:541 → 605
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:58 → 155
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:33 → 54
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:149 → 168
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:653 → 692
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:232 → 448
    DUF5401; Family of unknown function (DUF5401)

  5. XM_040685733.2 → XP_040541667.1  E3 ubiquitin-protein ligase LRSAM1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ABF0
    Conserved Domains (5) summary
    cd09523
    Location:567 → 631
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:65 → 181
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:33 → 54
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:679 → 718
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:258 → 474
    DUF5401; Family of unknown function (DUF5401)

  6. XM_040685734.2 → XP_040541668.1  E3 ubiquitin-protein ligase LRSAM1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AE80
    Conserved Domains (5) summary
    cd09523
    Location:554 → 618
    SAM_TAL; SAM domain of TAL subfamily
    COG4886
    Location:52 → 168
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:20 → 41
    LRR_RI; leucine-rich repeat [structural motif]
    cd16515
    Location:666 → 705
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:245 → 461
    DUF5401; Family of unknown function (DUF5401)

  7. XM_040685740.2 → XP_040541674.1  E3 ubiquitin-protein ligase LRSAM1 isoform X5

    Conserved Domains (3) summary
    cd09523
    Location:383 → 447
    SAM_TAL; SAM domain of TAL subfamily
    cd16515
    Location:495 → 534
    RING-HC_LRSAM1; RING finger, HC subclass, found in leucine-rich repeat and sterile alpha motif-containing protein 1 (LRSAM1) and similar proteins
    pfam17380
    Location:74 → 290
    DUF5401; Family of unknown function (DUF5401)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials