U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RXRA retinoid X receptor alpha [ Gallus gallus (chicken) ]

Gene ID: 417143, updated on 21-Dec-2022

Summary

Symbol
RXRAprovided by CGNC
Full Name
retinoid X receptor alphaprovided by CGNC
Primary source
CGNC:1890
See related
Ensembl:ENSGALG00010028422
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See RXRA in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (7885032..7962921)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (7295986..7374007)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene ly6/PLAUR domain-containing protein 1-like Neighboring gene uncharacterized LOC101750481 Neighboring gene uncharacterized LOC107052216 Neighboring gene uncharacterized LOC107052217 Neighboring gene uncharacterized LOC417142

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Homology

General protein information

Preferred Names
retinoic acid receptor RXR-alpha

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7885032..7962921
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003642291.6XP_003642339.2  retinoic acid receptor RXR-alpha isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2B5
    Related
    ENSGALP00010042285.1, ENSGALT00010068843.1
    Conserved Domains (3) summary
    cd06943
    Location:234445
    NR_LBD_RXR_like; The ligand binding domain of the retinoid X receptor and Ultraspiracle, members of nuclear receptor superfamily
    cd06956
    Location:138214
    NR_DBD_RXR; DNA-binding domain of retinoid X receptor (RXR) is composed of two C4-type zinc fingers
    pfam11825
    Location:18132
    Nuc_recep-AF1; Nuclear/hormone receptor activator site AF-1
  2. XM_046901862.1XP_046757818.1  retinoic acid receptor RXR-alpha isoform X4

  3. XM_046901861.1XP_046757817.1  retinoic acid receptor RXR-alpha isoform X3

  4. XM_015279790.3XP_015135276.1  retinoic acid receptor RXR-alpha isoform X2

    UniProtKB/TrEMBL
    A0A8V1A8J8
    Related
    ENSGALP00010042279.1, ENSGALT00010068837.1
    Conserved Domains (3) summary
    cd06943
    Location:232443
    NR_LBD_RXR_like; The ligand binding domain of the retinoid X receptor and Ultraspiracle, members of nuclear receptor superfamily
    cd06956
    Location:136212
    NR_DBD_RXR; DNA-binding domain of retinoid X receptor (RXR) is composed of two C4-type zinc fingers
    pfam11825
    Location:16129
    Nuc_recep-AF1; Nuclear/hormone receptor activator site AF-1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7295986..7374007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040686122.2XP_040542056.1  retinoic acid receptor RXR-alpha isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2B5
    Conserved Domains (3) summary
    cd06943
    Location:234445
    NR_LBD_RXR_like; The ligand binding domain of the retinoid X receptor and Ultraspiracle, members of nuclear receptor superfamily
    cd06956
    Location:138214
    NR_DBD_RXR; DNA-binding domain of retinoid X receptor (RXR) is composed of two C4-type zinc fingers
    pfam11825
    Location:18132
    Nuc_recep-AF1; Nuclear/hormone receptor activator site AF-1
  2. XM_040686123.1XP_040542057.1  retinoic acid receptor RXR-alpha isoform X2

    UniProtKB/TrEMBL
    A0A8V1A8J8
    Conserved Domains (3) summary
    cd06943
    Location:232443
    NR_LBD_RXR_like; The ligand binding domain of the retinoid X receptor and Ultraspiracle, members of nuclear receptor superfamily
    cd06956
    Location:136212
    NR_DBD_RXR; DNA-binding domain of retinoid X receptor (RXR) is composed of two C4-type zinc fingers
    pfam11825
    Location:16129
    Nuc_recep-AF1; Nuclear/hormone receptor activator site AF-1