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TRIM7.1 tripartite motif containing 7.1 [ Gallus gallus (chicken) ]

Gene ID: 417040, updated on 21-Dec-2022

Summary

Official Symbol
TRIM7.1provided by CGNC
Official Full Name
tripartite motif containing 7.1provided by CGNC
Primary source
CGNC:51
See related
Ensembl:ENSGALG00010002722
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TRIM7
Orthologs
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Genomic context

See TRIM7.1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 16 NC_052547.1 (2102195..2112145, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 16 NC_052588.1 (1003167..1013259, complement)

Chromosome 16 - NC_052547.1Genomic Context describing neighboring genes Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene secreted LY6/PLAUR domain containing 1 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene transfer RNA lysine (anticodon CUU)

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
tripartite motif-containing protein 7
Names
Tripartite motif protein 7
tripartite motif containing 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001398218.1NP_001385147.1  tripartite motif-containing protein 7

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000283
    UniProtKB/TrEMBL
    A0A8V0XGW7
    Related
    ENSGALP00010003906.1, ENSGALT00010006308.1
    Conserved Domains (4) summary
    TIGR02169
    Location:238338
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd13740
    Location:407576
    SPRY_PRY_TRIM7; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)
    cd16590
    Location:112156
    RING-HC_TRIM4_C-IV_like; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM4, TRIM75, tripartite motif family-like protein 1 (TRIML1) and similar proteins
    cd19762
    Location:192235
    Bbox2_TRIM7-like; B-box-type 2 zinc finger found in tripartite motif-containing proteins TRIM7, TRIM27 and similar proteins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052547.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2102195..2112145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015294952.3XP_015150438.2  tripartite motif-containing protein 7 isoform X2

    Conserved Domains (4) summary
    TIGR02169
    Location:149249
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd13740
    Location:318487
    SPRY_PRY_TRIM7; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)
    cd16590
    Location:2367
    RING-HC_TRIM4_C-IV_like; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM4, TRIM75, tripartite motif family-like protein 1 (TRIML1) and similar proteins
    cd19762
    Location:103146
    Bbox2_TRIM7-like; B-box-type 2 zinc finger found in tripartite motif-containing proteins TRIM7, TRIM27 and similar proteins
  2. XM_046901481.1XP_046757437.1  tripartite motif-containing protein 7 isoform X1

    Related
    ENSGALP00010003909.1, ENSGALT00010006313.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052588.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1003167..1013259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046928533.1XP_046784489.1  tripartite motif-containing protein 7 isoform X1

  2. XM_046928535.1XP_046784491.1  tripartite motif-containing protein 7 isoform X2

  3. XM_046928536.1XP_046784492.1  tripartite motif-containing protein 7 isoform X4

  4. XM_046928534.1XP_046784490.1  tripartite motif-containing protein 7 isoform X3

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001099352.1: Suppressed sequence

    Description
    NM_001099352.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.