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POP5 POP5 homolog, ribonuclease P/MRP subunit [ Gallus gallus (chicken) ]

Gene ID: 416973, updated on 17-Aug-2024
Symbol
POP5provided by CGNC
Full Name
POP5 homolog, ribonuclease P/MRP subunitprovided by CGNC
Primary source
CGNC:5381
See related
Ensembl:ENSGALG00010023093
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See POP5 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (9260393..9262123)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (9271322..9272666)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene unc-119 lipid binding chaperone B Neighboring gene uncharacterized LOC121106861 Neighboring gene malectin Neighboring gene calcium binding protein 1 Neighboring gene ring finger protein 10 Neighboring gene microRNA mir-12229 Neighboring gene dynein light chain 2 cytoplasmic

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribonuclease P RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA 5'-leader removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonuclease P complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ribonuclease P/MRP protein subunit POP5
Names
processing of precursor 5, ribonuclease P/MRP subunit
XP_004934442.1
XP_015130896.2
XP_040504106.1
XP_040540902.1
XP_040540903.1
XP_040540905.1
XP_040540906.1
XP_046757357.1
XP_046757358.1
XP_046784447.1
XP_046784448.1
XP_415266.2

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9260393..9262123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046901401.1 → XP_046757357.1  ribonuclease P/MRP protein subunit POP5 isoform X1

    Related
    ENSGALP00010034059.1, ENSGALT00010056264.1

  2. XM_015275410.4 → XP_015130896.2  ribonuclease P/MRP protein subunit POP5 isoform X2

    Conserved Domains (1) summary
    cl00605
    Location:93 → 158
    RNase_P_Rpp14; Rpp14/Pop5 family

  3. XM_040648172.2 → XP_040504106.1  ribonuclease P/MRP protein subunit POP5 isoform X3

  4. XM_046901402.1 → XP_046757358.1  ribonuclease P/MRP protein subunit POP5 isoform X5

  5. XM_415266.8 → XP_415266.2  ribonuclease P/MRP protein subunit POP5 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZRC2
    Related
    ENSGALP00010034057.1, ENSGALT00010056261.1
    Conserved Domains (1) summary
    pfam01900
    Location:7 → 115
    RNase_P_Rpp14; Rpp14/Pop5 family

  6. XM_004934385.5 → XP_004934442.1  ribonuclease P/MRP protein subunit POP5 isoform X6

    Conserved Domains (1) summary
    cl00605
    Location:7 → 54
    RNase_P_Rpp14; Rpp14/Pop5 family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9271322..9272666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046928491.1 → XP_046784447.1  ribonuclease P/MRP protein subunit POP5 isoform X7

  2. XM_040684968.1 → XP_040540902.1  ribonuclease P/MRP protein subunit POP5 isoform X8

    Conserved Domains (1) summary
    cl00605
    Location:90 → 161
    RNase_P_Rpp14; Rpp14/Pop5 family

  3. XM_040684969.1 → XP_040540903.1  ribonuclease P/MRP protein subunit POP5 isoform X9

  4. XM_046928492.1 → XP_046784448.1  ribonuclease P/MRP protein subunit POP5 isoform X10

  5. XM_040684971.2 → XP_040540905.1  ribonuclease P/MRP protein subunit POP5 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZRC2
    Conserved Domains (1) summary
    pfam01900
    Location:7 → 115
    RNase_P_Rpp14; Rpp14/Pop5 family

  6. XM_040684972.2 → XP_040540906.1  ribonuclease P/MRP protein subunit POP5 isoform X6

    Conserved Domains (1) summary
    cl00605
    Location:7 → 54
    RNase_P_Rpp14; Rpp14/Pop5 family
Nucleotide Protein
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