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FBXW11 F-box and WD repeat domain containing 11 [ Gallus gallus (chicken) ]

Gene ID: 416181, updated on 14-Feb-2019

Summary

Symbol
FBXW11provided by CGNC
Full Name
F-box and WD repeat domain containing 11provided by CGNC
Primary source
CGNC:50183
See related
Ensembl:ENSGALG00000002229
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs

Genomic context

See FBXW11 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
19
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 13 NC_006100.5 (3563662..3637761)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 13 NC_006100.4 (2822064..2888103)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 13 NC_006100.3 (2192714..2258000)

Chromosome 13 - NC_006100.5Genomic Context describing neighboring genes Neighboring gene catenin alpha 1 Neighboring gene basic proline-rich protein-like Neighboring gene small nucleolar RNA SNORD63 Neighboring gene heat shock protein family A (Hsp70) member 9 Neighboring gene eukaryotic translation termination factor 1 Neighboring gene uncharacterized LOC112533417 Neighboring gene uncharacterized LOC101748278 Neighboring gene uncharacterized LOC107054496

Genomic regions, transcripts, and products

Pathways from BioSystems

  • Hedgehog signaling pathway, organism-specific biosystem (from KEGG)
    Hedgehog signaling pathway, organism-specific biosystemThe Hedgehog (Hh) signaling pathway has numerous roles in the control of cell proliferation, tissue patterning, stem cell maintenance and development. The primary cilium is an important center for tr...
  • Hedgehog signaling pathway, conserved biosystem (from KEGG)
    Hedgehog signaling pathway, conserved biosystemThe Hedgehog (Hh) signaling pathway has numerous roles in the control of cell proliferation, tissue patterning, stem cell maintenance and development. The primary cilium is an important center for tr...
  • Oocyte meiosis, organism-specific biosystem (from KEGG)
    Oocyte meiosis, organism-specific biosystemDuring meiosis, a single round of DNA replication is followed by two rounds of chromosome segregation, called meiosis I and meiosis II. At meiosis I, homologous chromosomes recombine and then segrega...
  • Oocyte meiosis, conserved biosystem (from KEGG)
    Oocyte meiosis, conserved biosystemDuring meiosis, a single round of DNA replication is followed by two rounds of chromosome segregation, called meiosis I and meiosis II. At meiosis I, homologous chromosomes recombine and then segrega...
  • SCF-BTRC complex, organism-specific biosystem (from KEGG)
    SCF-BTRC complex, organism-specific biosystemStructural complex; Genetic information processing; Ubiquitin system
  • SCF-BTRC complex, conserved biosystem (from KEGG)
    SCF-BTRC complex, conserved biosystemStructural complex; Genetic information processing; Ubiquitin system
  • Ubiquitin mediated proteolysis, organism-specific biosystem (from KEGG)
    Ubiquitin mediated proteolysis, organism-specific biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
  • Ubiquitin mediated proteolysis, conserved biosystem (from KEGG)
    Ubiquitin mediated proteolysis, conserved biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
  • Wnt signaling pathway, organism-specific biosystem (from KEGG)
    Wnt signaling pathway, organism-specific biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...
  • Wnt signaling pathway, conserved biosystem (from KEGG)
    Wnt signaling pathway, conserved biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...

General gene information

Homology

General protein information

Preferred Names
F-box/WD repeat-containing protein 11
Names
F-box and WD-40 domain protein 11

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039262.1NP_001034351.1  F-box/WD repeat-containing protein 11

    See identical proteins and their annotated locations for NP_001034351.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ721075
    UniProtKB/TrEMBL
    Q5ZHQ9
    Related
    ENSGALP00000003484.5, ENSGALT00000003489.6
    Conserved Domains (5) summary
    COG2319
    Location:209512
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:227505
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12125
    Location:65103
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:107154
    F-box-like; F-box-like
    sd00039
    Location:230265
    7WD40; WD40 repeat [structural motif]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006100.5 Reference GRCg6a Primary Assembly

    Range
    3563662..3637761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025154836.1XP_025010604.1  F-box/WD repeat-containing protein 11 isoform X4

    Conserved Domains (4) summary
    cd00200
    Location:208486
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:211246
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:4684
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:88135
    F-box-like; F-box-like
  2. XM_025154837.1XP_025010605.1  F-box/WD repeat-containing protein 11 isoform X4

    Conserved Domains (4) summary
    cd00200
    Location:208486
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:211246
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:4684
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:88135
    F-box-like; F-box-like
  3. XM_025154838.1XP_025010606.1  F-box/WD repeat-containing protein 11 isoform X4

    Conserved Domains (4) summary
    cd00200
    Location:208486
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:211246
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:4684
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:88135
    F-box-like; F-box-like
  4. XM_025154839.1XP_025010607.1  F-box/WD repeat-containing protein 11 isoform X4

    Conserved Domains (4) summary
    cd00200
    Location:208486
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:211246
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:4684
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:88135
    F-box-like; F-box-like
  5. XM_015293593.2XP_015149079.1  F-box/WD repeat-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A1D5NXE7
    Conserved Domains (5) summary
    COG2319
    Location:211514
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:229507
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12125
    Location:67105
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:109156
    F-box-like; F-box-like
    sd00039
    Location:232267
    7WD40; WD40 repeat [structural motif]
  6. XM_015293594.2XP_015149080.1  F-box/WD repeat-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A1D5NXE7
    Related
    ENSGALP00000045042.1, ENSGALT00000079707.2
    Conserved Domains (5) summary
    COG2319
    Location:211514
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:229507
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12125
    Location:67105
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:109156
    F-box-like; F-box-like
    sd00039
    Location:232267
    7WD40; WD40 repeat [structural motif]
  7. XM_015293596.2XP_015149082.1  F-box/WD repeat-containing protein 11 isoform X4

    UniProtKB/TrEMBL
    A0A1D5NYD3
    Conserved Domains (4) summary
    cd00200
    Location:208486
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:211246
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:4684
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:88135
    F-box-like; F-box-like
  8. XM_015293592.2XP_015149078.1  F-box/WD repeat-containing protein 11 isoform X1

    Conserved Domains (5) summary
    COG2319
    Location:243546
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:261539
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12125
    Location:99137
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:141188
    F-box-like; F-box-like
    sd00039
    Location:264299
    7WD40; WD40 repeat [structural motif]
  9. XM_015293595.2XP_015149081.1  F-box/WD repeat-containing protein 11 isoform X3

    Conserved Domains (5) summary
    COG2319
    Location:202505
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:220498
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12125
    Location:5896
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:100147
    F-box-like; F-box-like
    sd00039
    Location:223258
    7WD40; WD40 repeat [structural motif]
  10. XM_015293597.2XP_015149083.1  F-box/WD repeat-containing protein 11 isoform X4

    UniProtKB/TrEMBL
    A0A1D5NYD3
    Related
    ENSGALP00000068290.1, ENSGALT00000101372.1
    Conserved Domains (4) summary
    cd00200
    Location:208486
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:211246
    7WD40; WD40 repeat [structural motif]
    pfam12125
    Location:4684
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:88135
    F-box-like; F-box-like
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