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timeout [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41615, updated on 28-Aug-2019

Summary

Official Symbol
timeoutprovided by FlyBase
Primary source
FLYBASE:FBgn0038118
Locus tag
Dmel_CG7855
Gene type
protein coding
RNA name
timeout
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG14381; CG14382; CG7855; CG8148; Dmel\CG7855; dtim2; Tim-2; tim2; TIM2

Genomic context

See timeout in Genome Data Viewer
Location:
87D12-87D14; 3-53 cM
Exon count:
18
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13088651..13163876)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (8914373..8989598)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44967 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46019 Neighboring gene long non-coding RNA:CR45109 Neighboring gene 2mit Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

mobile_element

  • Loc: 13135881-13138000 mobile_element_type = transposon:pogo{}1350

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
DNA damage checkpoint IMP
Inferred from Mutant Phenotype
more info
PubMed 
DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA replication checkpoint IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
entrainment of circadian clock IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
entrainment of circadian clock IMP
Inferred from Mutant Phenotype
more info
PubMed 
replication fork arrest IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
replication fork protection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
nuclear chromatin IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
replication fork protection complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
timeout
Names
CG7855-PA
timeless 2
timeless2
timeout-PA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    13088651..13163876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079617.3NP_524341.3  timeout [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524341.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8INH7
    Related
    FBpp0082180, FBtr0082712
    Conserved Domains (2) summary
    pfam05029
    Location:7361217
    TIMELESS_C; Timeless protein C terminal region
    pfam04821
    Location:23281
    TIMELESS; Timeless protein
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