Format

Send to:

Choose Destination

CYLD CYLD lysine 63 deubiquitinase [ Gallus gallus (chicken) ]

Gene ID: 415725, updated on 2-Apr-2017
Symbol
CYLDprovided by CGNC
Full Name
CYLD lysine 63 deubiquitinaseprovided by CGNC
Primary source
CGNC:2744
See related
Ensembl:ENSGALG00000003753
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
Location:
chromosome: 11
Exon count:
19
Annotation release Status Assembly Chr Location
103 current Gallus_gallus-5.0 (GCF_000002315.4) 11 NC_006098.4 (6271943..6299396, complement)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 11 NC_006098.3 (5634365..5660109, complement)

Chromosome 11 - NC_006098.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054276 Neighboring gene spalt like transcription factor 1 Neighboring gene uncharacterized LOC107054278 Neighboring gene sorting nexin 20 Neighboring gene uncharacterized LOC107054279 Neighboring gene naked cuticle homolog 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • RIG-I-like receptor signaling pathway, organism-specific biosystem (from KEGG)
    RIG-I-like receptor signaling pathway, organism-specific biosystemSpecific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular ...
  • RIG-I-like receptor signaling pathway, conserved biosystem (from KEGG)
    RIG-I-like receptor signaling pathway, conserved biosystemSpecific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular ...

Markers

Homology

Preferred Names
ubiquitin carboxyl-terminal hydrolase CYLD
Names
cylindromatosis (turban tumor syndrome)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gallus_gallus-5.0 Primary Assembly

Genomic

  1. NC_006098.4 Reference Gallus_gallus-5.0 Primary Assembly

    Range
    6271943..6299396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_414091.5XP_414091.2  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    See identical proteins and their annotated locations for XP_414091.2

    UniProtKB/TrEMBL
    F1NH67
    Conserved Domains (3) summary
    smart01052
    Location:471538
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:591946
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:305469
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  2. XM_004944176.2XP_004944233.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X2

    Conserved Domains (3) summary
    smart01052
    Location:426493
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:546901
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:260424
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  3. XM_004944175.2XP_004944232.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    See identical proteins and their annotated locations for XP_004944232.1

    UniProtKB/TrEMBL
    F1NH67
    Conserved Domains (3) summary
    smart01052
    Location:471538
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:591946
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:305469
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  4. XM_015292398.1XP_015147884.1  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    UniProtKB/TrEMBL
    F1NH67
    Related
    ENSGALP00000016104.5, ENSGALT00000016123.5
    Conserved Domains (3) summary
    smart01052
    Location:471538
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:591946
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:305469
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
Support Center