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BLM Bloom syndrome RecQ like helicase [ Gallus gallus (chicken) ]

Gene ID: 415577, updated on 17-Aug-2024

Summary

Symbol
BLMprovided by CGNC
Full Name
Bloom syndrome RecQ like helicaseprovided by CGNC
Primary source
CGNC:6254
See related
Ensembl:ENSGALG00010016393
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
ORF1
Orthologs
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Genomic context

See BLM in Genome Data Viewer
Location:
chromosome: 10
Exon count:
21
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (19935048..19951142, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (19798921..19814965, complement)

Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene FERM domain containing 5 Neighboring gene WD repeat domain 76 Neighboring gene cathepsin H Neighboring gene Ras protein specific guanine nucleotide releasing factor 1 Neighboring gene uncharacterized LOC121111640

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables four-way junction helicase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in DNA unwinding involved in DNA replication IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in G-quadruplex DNA unwinding IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
recQ-like DNA helicase BLM
Names
BLM helicase
Bloom syndrome, RecQ helicase-like
DNA 3'-5' helicase BLM
Gd BLM
recQ helicase homolog
NP_001007088.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007087.2NP_001007088.3  recQ-like DNA helicase BLM

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000246
    UniProtKB/TrEMBL
    A0A8V0YVN0, D3KR64
    Related
    ENSGALP00010022807.1, ENSGALT00010039519.1
    Conserved Domains (3) summary
    smart00341
    Location:11811260
    HRDC; Helicase and RNase D C-terminal
    TIGR00614
    Location:6251111
    recQ_fam; ATP-dependent DNA helicase, RecQ family
    PRK07003
    Location:18146
    PRK07003; DNA polymerase III subunit gamma/tau

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    19935048..19951142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    19798921..19814965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)