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CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit [ Gallus gallus (chicken) ]

Gene ID: 415527, updated on 14-Feb-2019

Summary

Symbol
CLPXprovided by CGNC
Full Name
caseinolytic mitochondrial matrix peptidase chaperone subunitprovided by CGNC
Primary source
CGNC:5510
See related
Ensembl:ENSGALG00000007289
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs

Genomic context

See CLPX in Genome Data Viewer
Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 10 NC_006097.5 (18168002..18187753)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 10 NC_006097.4 (17754044..17773795)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 10 NC_006097.3 (17224900..17244651)

Chromosome 10 - NC_006097.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054246 Neighboring gene ankyrin repeat and death domain containing 1A Neighboring gene spastic paraplegia 21 (autosomal recessive, Mast syndrome) Neighboring gene programmed cell death 7 Neighboring gene ubiquitin associated protein 1 like Neighboring gene kelch repeat and BTB domain containing 13

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial
Names
ClpX caseinolytic peptidase X homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030552.1NP_001025723.1  ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial

    See identical proteins and their annotated locations for NP_001025723.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ719607
    UniProtKB/TrEMBL
    Q5ZLX7
    Related
    ENSGALP00000011790.5, ENSGALT00000011804.6
    Conserved Domains (4) summary
    smart01086
    Location:506589
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
    TIGR00382
    Location:99597
    clpX; endopeptidase Clp ATP-binding regulatory subunit (clpX)
    pfam07724
    Location:283499
    AAA_2; AAA domain (Cdc48 subfamily)
    cl02609
    Location:101129
    Zn-ribbon; C-terminal zinc ribbon domain of RNA polymerase intrinsic transcript cleavage subunit

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006097.5 Reference GRCg6a Primary Assembly

    Range
    18168002..18187753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015292092.2XP_015147578.1  ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1

    UniProtKB/TrEMBL
    E1BX77
    Related
    ENSGALP00000037625.3, ENSGALT00000038419.4
    Conserved Domains (4) summary
    smart01086
    Location:492575
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
    TIGR00382
    Location:99583
    clpX; endopeptidase Clp ATP-binding regulatory subunit (clpX)
    pfam07724
    Location:269485
    AAA_2; AAA domain (Cdc48 subfamily)
    cl02609
    Location:101129
    Zn-ribbon; C-terminal zinc ribbon domain of RNA polymerase intrinsic transcript cleavage subunit
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