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CNTFR-AS1 CNTFR antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 415056, updated on 13-May-2022

Summary

Official Symbol
CNTFR-AS1provided by HGNC
Official Full Name
CNTFR antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:48712
See related
Ensembl:ENSG00000237159 AllianceGenome:HGNC:48712
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 2.9), fat (RPKM 0.7) and 1 other tissue See more
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Genomic context

See CNTFR-AS1 in Genome Data Viewer
Location:
9p13.3
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (34568012..34583072)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (34586563..34601619)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (34568010..34583070)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene dynein axonemal intermediate chain 1 Neighboring gene Sharpr-MPRA regulatory regions 5304 and 15183 Neighboring gene energy homeostasis associated Neighboring gene ciliary neurotrophic factor receptor Neighboring gene uncharacterized LOC105376023 Neighboring gene ribonuclease P/MRP subunit p25 like Neighboring gene dynactin subunit 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024369.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC038740, BC042806
    Related
    ENST00000657464.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    34568012..34583072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    34586563..34601619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)