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C8orf82 chromosome 8 open reading frame 82 [ Homo sapiens (human) ]

Gene ID: 414919, updated on 1-Jun-2020

Summary

Official Symbol
C8orf82provided by HGNC
Official Full Name
chromosome 8 open reading frame 82provided by HGNC
Primary source
HGNC:HGNC:33826
See related
Ensembl:ENSG00000213563
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in kidney (RPKM 14.8), prostate (RPKM 12.3) and 25 other tissues See more
Orthologs

Genomic context

See C8orf82 in Genome Data Viewer
Location:
8q24.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (144525733..144529111, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (145751599..145754485, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene RecQ like helicase 4 Neighboring gene leucine rich repeat containing 14 Neighboring gene leucine rich repeat containing 24 Neighboring gene Rho GTPase activating protein 39 Neighboring gene uncharacterized LOC100996662 Neighboring gene uncharacterized LOC107986986 Neighboring gene zinc finger protein 251

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC70857

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001795.2NP_001001795.1  UPF0598 protein C8orf82

    See identical proteins and their annotated locations for NP_001001795.1

    Status: VALIDATED

    Source sequence(s)
    AC084125, BC064373
    Consensus CDS
    CCDS34970.1
    UniProtKB/Swiss-Prot
    Q6P1X6
    Related
    ENSP00000436621.1, ENST00000524821.6
    Conserved Domains (1) summary
    pfam14956
    Location:29206
    DUF4505; Domain of unknown function (DUF4505)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    144525733..144529111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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