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dhx15.L DEAH-box helicase 15 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414571, updated on 8-Apr-2017

Summary

Symbol
dhx15.L
Full Name
DEAH-box helicase 15 L homeolog
Primary source
Xenbase:XB-GENE-1008948
Locus tag
XELAEV_18005175mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
dhx15

Genomic context

See dhx15.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (24164279..24205150, complement)

Chromosome 1L - NC_030724.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor A3-like Neighboring gene glucosidase, beta, acid 3 (gene/pseudogene) L homeolog Neighboring gene PPARG coactivator 1 alpha L homeolog Neighboring gene coiled-coil domain containing 149 L homeolog Neighboring gene superoxide dismutase 3 L homeolog

Genomic regions, transcripts, and products

Genomic Sequence:
NC_030724.1 Chromosome 1L Reference Xenopus_laevis_v2 Primary Assembly

Pathways from BioSystems

  • Spliceosome, organism-specific biosystem (from KEGG)
    Spliceosome, organism-specific biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
  • Spliceosome, conserved biosystem (from KEGG)
    Spliceosome, conserved biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...

General protein information

Preferred Names
DEAH-box helicase 15 L homeolog
Names
DEAH (Asp-Glu-Ala-His) box helicase 15
DEAH (Asp-Glu-Ala-His) box polypeptide 15

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091146.1NP_001084615.1  DEAH-box helicase 15 L homeolog

    See identical proteins and their annotated locations for NP_001084615.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068766
    UniProtKB/TrEMBL
    Q6NU35
    Conserved Domains (6) summary
    smart00490
    Location:348441
    HELICc; helicase superfamily c-terminal domain
    smart00487
    Location:97288
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:511594
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:120261
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cl22853
    Location:81133
    Motor_domain; Myosin and Kinesin motor domain
    pfam07717
    Location:628731
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030724.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    24164279..24205150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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