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CCNYL2 cyclin Y like 2 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 414194, updated on 23-Nov-2023

Summary

Official Symbol
CCNYL2provided by HGNC
Official Full Name
cyclin Y like 2 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:23495
See related
Ensembl:ENSG00000290445 AllianceGenome:HGNC:23495
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CCNYL2P; C10orf21; bA178A10.2
Summary
Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in positive regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to be active in cytoplasm and plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis (RPKM 2.0) and brain (RPKM 0.1) See more
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Genomic context

See CCNYL2 in Genome Data Viewer
Location:
10q11.21
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (42408174..42472240, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (43285761..43349780, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (42903622..42967688, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene poly(A) binding protein cytoplasmic 1 pseudogene 8 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42794470-42795297 Neighboring gene NANOG hESC enhancer GRCh37_chr10:42796185-42796686 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42796729-42797555 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42798247-42798939 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42816107-42816891 Neighboring gene zinc finger protein 91 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3277 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3279 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3278 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3276 Neighboring gene long intergenic non-protein coding RNA 839 Neighboring gene zinc finger protein 37B, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:43034693-43035194 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:43035195-43035694 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:43047054-43047592

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • cyclin-Y-like protein 2

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of canonical Wnt signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of protein kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103829.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL391099, BC039000
    Related
    ENST00000637719.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    42408174..42472240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    43285761..43349780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)