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C10orf105 chromosome 10 open reading frame 105 [ Homo sapiens (human) ]

Gene ID: 414152, updated on 23-Nov-2021

Summary

Official Symbol
C10orf105provided by HGNC
Official Full Name
chromosome 10 open reading frame 105provided by HGNC
Primary source
HGNC:HGNC:20304
See related
Ensembl:ENSG00000214688
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in spleen (RPKM 1.7), testis (RPKM 0.9) and 19 other tissues See more
Orthologs
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Genomic context

See C10orf105 in Genome Data Viewer
Location:
10q22.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (71711701..71737850, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (73471458..73497607, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene cadherin related 23 Neighboring gene uncharacterized LOC105378355 Neighboring gene Sharpr-MPRA regulatory region 11817 Neighboring gene V-set immunoregulatory receptor Neighboring gene microRNA 7152

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ00245

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein C10orf105

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164375.3NP_001157847.1  uncharacterized protein C10orf105

    See identical proteins and their annotated locations for NP_001157847.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AL731541, BC071608
    Consensus CDS
    CCDS44430.1
    UniProtKB/Swiss-Prot
    Q8TEF2
    Related
    ENSP00000403151.2, ENST00000441508.4
  2. NM_001168390.2NP_001161862.1  uncharacterized protein C10orf105

    See identical proteins and their annotated locations for NP_001161862.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AK074172, AL731541
    Consensus CDS
    CCDS44430.1
    UniProtKB/Swiss-Prot
    Q8TEF2
    Related
    ENSP00000381766.3, ENST00000398786.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    71711701..71737850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011539809.2XP_011538111.1  uncharacterized protein C10orf105 isoform X1

    See identical proteins and their annotated locations for XP_011538111.1

    UniProtKB/Swiss-Prot
    Q8TEF2
  2. XM_011539808.2XP_011538110.1  uncharacterized protein C10orf105 isoform X1

    See identical proteins and their annotated locations for XP_011538110.1

    UniProtKB/Swiss-Prot
    Q8TEF2
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