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B130034C11Rik RIKEN cDNA B130034C11 gene [ Mus musculus (house mouse) ]

Gene ID: 414095, updated on 8-Feb-2024

Summary

Official Symbol
B130034C11Rikprovided by MGI
Official Full Name
RIKEN cDNA B130034C11 geneprovided by MGI
Primary source
MGI:MGI:3041186
See related
Ensembl:ENSMUSG00000093606 AllianceGenome:MGI:3041186
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in CNS E11.5 (RPKM 1.8), CNS E14 (RPKM 1.7) and 27 other tissues See more
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Genomic context

See B130034C11Rik in Genome Data Viewer
Location:
16 C3.3; 16 49.58 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (87292961..87300926)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (87496073..87504038)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11624 Neighboring gene RWD domain containing 2B Neighboring gene STARR-positive B cell enhancer ABC_E10922 Neighboring gene ubiquitin specific peptidase 16 Neighboring gene STARR-positive B cell enhancer ABC_E5556 Neighboring gene chaperonin containing TCP1 subunit 8 Neighboring gene predicted gene, 24891 Neighboring gene ribosomal protein L31, pseudogene 4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040375.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC154631
    Related
    ENSMUST00000175717.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    87292961..87300926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)