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CG6345 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41271, updated on 4-Apr-2024

Summary

Official Symbol
CG6345provided by FlyBase
Primary source
FLYBASE:FBgn0037816
Locus tag
Dmel_CG6345
See related
AllianceGenome:FB:FBgn0037816
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
149631_at; Dmel\CG6345
Summary
Predicted to enable N6-isopentenyladenosine methylthiotransferase activity. Predicted to be involved in negative regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to be active in cytosol and mitochondrion. Is expressed in several structures, including anterior endoderm anlage; dorsal pharyngeal muscle cell; embryonic Malpighian tubule; gastrula embryo; and germ layer derivative. Orthologous to human CDK5RAP1 (CDK5 regulatory subunit associated protein 1). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
86B4-86B4; 3-49 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10414218..10416046, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6239940..6241768, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mir-318 stem loop Neighboring gene Iron regulatory protein 1B Neighboring gene Rrp46 Neighboring gene uncharacterized protein Neighboring gene Cytochrome P450 12e1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables N6-isopentenyladenosine methylthiotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables methylthiotransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in negative regulation of cyclin-dependent protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in tRNA modification IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein
Names
CG6345-PA
NP_650002.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    10414218..10416046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141745.4NP_650002.1  uncharacterized protein Dmel_CG6345 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650002.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VGZ1
    Related
    FBpp0081735
    Conserved Domains (3) summary
    PRK14329
    Location:88570
    PRK14329; (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
    pfam00919
    Location:93196
    UPF0004; Uncharacterized protein family UPF0004
    pfam01938
    Location:494568
    TRAM; TRAM domain