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LOC410757 circadian locomoter output cycles protein kaput [ Apis mellifera (honey bee) ]

Gene ID: 410757, updated on 8-Jan-2019

Summary

Gene symbol
LOC410757
Gene description
circadian locomoter output cycles protein kaput
See related
BEEBASE:GB48028
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis
Also known as
Clk

Genomic context

See LOC410757 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
12
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG1 NC_037638.1 (3160299..3166163)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG1 NC_007070.3 (3344299..3350155, complement)

Linkage Group LG1 - NC_037638.1Genomic Context describing neighboring genes Neighboring gene RRP15-like protein Neighboring gene mRNA decay activator protein ZFP36L3 Neighboring gene protein henna Neighboring gene mitochondrial basic amino acids transporter

Genomic regions, transcripts, and products

Pathways from BioSystems

  • Circadian rhythm - fly, organism-specific biosystem (from KEGG)
    Circadian rhythm - fly, organism-specific biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In the fruit fly Drosophila melanogaster, seven genes ...

General protein information

Preferred Names
circadian locomoter output cycles protein kaput
Names
clock

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037638.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    3160299..3166163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_394233.7XP_394233.5  circadian locomoter output cycles protein kaput isoform X1

    Conserved Domains (3) summary
    smart00091
    Location:102165
    PAS; PAS domain
    cd00083
    Location:3279
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl25986
    Location:261364
    PAS_3; PAS fold
  2. XM_026443444.1XP_026299229.1  circadian locomoter output cycles protein kaput isoform X2

    Conserved Domains (2) summary
    smart00091
    Location:150
    PAS; PAS domain
    cl25986
    Location:146249
    PAS_3; PAS fold
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