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LOC408586 probable nuclear hormone receptor HR3 [ Apis mellifera (honey bee) ]

Gene ID: 408586, updated on 8-Jan-2019

Summary

Gene symbol
LOC408586
Gene description
probable nuclear hormone receptor HR3
See related
BEEBASE:GB47513
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis
Also known as
Hr46; NR1F4

Genomic context

See LOC408586 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
18
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG1 NC_037638.1 (15929284..16042016)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG1 NC_007070.3 (16476579..16590279, complement)

Linkage Group LG1 - NC_037638.1Genomic Context describing neighboring genes Neighboring gene protein quiver Neighboring gene histidine decarboxylase Neighboring gene uncharacterized LOC113218581 Neighboring gene dynactin subunit 6 Neighboring gene homeobox protein GBX-2

Genomic regions, transcripts, and products

General protein information

Preferred Names
probable nuclear hormone receptor HR3
Names
hormone receptor-like in 46

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037638.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    15929284..16042016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026445298.1XP_026301083.1  probable nuclear hormone receptor HR3 isoform X8

    Conserved Domains (2) summary
    cd06968
    Location:7101
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:354598
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  2. XM_026445274.1XP_026301059.1  probable nuclear hormone receptor HR3 isoform X4

    Conserved Domains (2) summary
    cd06968
    Location:64158
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:411655
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  3. XM_026445293.1XP_026301078.1  probable nuclear hormone receptor HR3 isoform X6

    Conserved Domains (2) summary
    cd06968
    Location:54148
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:401645
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  4. XM_026445296.1XP_026301081.1  probable nuclear hormone receptor HR3 isoform X7

    Conserved Domains (2) summary
    cd06968
    Location:42136
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:389633
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  5. XM_026445304.1XP_026301089.1  probable nuclear hormone receptor HR3 isoform X10

    Conserved Domains (2) summary
    cl02596
    Location:123
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    cl11397
    Location:276520
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  6. XM_026445266.1XP_026301051.1  probable nuclear hormone receptor HR3 isoform X1

    Conserved Domains (2) summary
    cd06968
    Location:237331
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:584828
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  7. XM_026445270.1XP_026301055.1  probable nuclear hormone receptor HR3 isoform X2

    Conserved Domains (2) summary
    cd06968
    Location:237331
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:578822
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  8. XM_026445271.1XP_026301056.1  probable nuclear hormone receptor HR3 isoform X3

    Conserved Domains (2) summary
    cd06968
    Location:237331
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:447691
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  9. XM_026445286.1XP_026301071.1  probable nuclear hormone receptor HR3 isoform X5

    Conserved Domains (2) summary
    cd06968
    Location:54148
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:401645
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  10. XM_026445276.1XP_026301061.1  probable nuclear hormone receptor HR3 isoform X5

    Conserved Domains (2) summary
    cd06968
    Location:54148
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:401645
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  11. XM_026445280.1XP_026301065.1  probable nuclear hormone receptor HR3 isoform X5

    Conserved Domains (2) summary
    cd06968
    Location:54148
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:401645
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  12. XM_026445288.1XP_026301073.1  probable nuclear hormone receptor HR3 isoform X5

    Conserved Domains (2) summary
    cd06968
    Location:54148
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:401645
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  13. XM_026445279.1XP_026301064.1  probable nuclear hormone receptor HR3 isoform X5

    Conserved Domains (2) summary
    cd06968
    Location:54148
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:401645
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  14. XM_026445302.1XP_026301087.1  probable nuclear hormone receptor HR3 isoform X9

    Conserved Domains (2) summary
    cl02596
    Location:428
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    cl11397
    Location:281525
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

RNA

  1. XR_003306105.1 RNA Sequence

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