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LOC408449 thyrotroph embryonic factor [ Apis mellifera (honey bee) ]

Gene ID: 408449, updated on 8-Jan-2019

Summary

Gene symbol
LOC408449
Gene description
thyrotroph embryonic factor
See related
BEEBASE:GB43643
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis
Also known as
Pdp1

Genomic context

See LOC408449 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
8
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG14 NC_037651.1 (5267634..5333920)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG14 NC_007083.3 (4778515..4824111)

Linkage Group LG14 - NC_037651.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107965504 Neighboring gene histone H1, gonadal Neighboring gene uncharacterized LOC113219229 Neighboring gene 60S ribosomal protein L23

Genomic regions, transcripts, and products

Pathways from BioSystems

  • Circadian rhythm - fly, organism-specific biosystem (from KEGG)
    Circadian rhythm - fly, organism-specific biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In the fruit fly Drosophila melanogaster, seven genes ...

General protein information

Preferred Names
thyrotroph embryonic factor
Names
PAR-domain protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037651.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    5267634..5333920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026445127.1XP_026300912.1  thyrotroph embryonic factor isoform X2

    Conserved Domains (1) summary
    cd14695
    Location:303362
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  2. XM_026445126.1XP_026300911.1  thyrotroph embryonic factor isoform X1

    Conserved Domains (1) summary
    cd14695
    Location:307366
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  3. XM_026445128.1XP_026300913.1  thyrotroph embryonic factor isoform X3

    Conserved Domains (1) summary
    cd14695
    Location:297356
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
  4. XM_006560237.3XP_006560300.1  thyrotroph embryonic factor isoform X4

    See identical proteins and their annotated locations for XP_006560300.1

    Conserved Domains (2) summary
    cd14695
    Location:267326
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
    pfam14303
    Location:201333
    NAM-associated; No apical meristem-associated C-terminal domain
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