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pb proboscipedia [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40826, updated on 28-Aug-2019

Summary

Official Symbol
pbprovided by FlyBase
Official Full Name
proboscipediaprovided by FlyBase
Primary source
FLYBASE:FBgn0051481
Locus tag
Dmel_CG31481
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BG:DS01719.1; CG17880; CG31481; Dmel\CG31481; Dmpb; l(3)04498; Pb; PB; pd; pr

Genomic context

Location:
84A5-84A5; 3-48 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6707800..6742063, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (2533522..2567785, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ccp84Ab Neighboring gene Ccp84Aa Neighboring gene zerknullt-related Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

mobile_element

  • Loc: c6739283-6737554 mobile_element_type = transposon:Doc{}1240

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
RNA polymerase II proximal promoter sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
proboscis development IMP
Inferred from Mutant Phenotype
more info
PubMed 
specification of segmental identity, labial segment IMP
Inferred from Mutant Phenotype
more info
PubMed 
specification of segmental identity, maxillary segment IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
proboscipedia
Names
CG31481-PA
CG31481-PB
CG31481-PC
CG31481-PD
pb-PA
pb-PB
pb-PC
pb-PD
proboscopedia
proposcipedia

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    6707800..6742063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_206439.2NP_996161.1  proboscipedia, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_996161.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P31264
    Related
    FBpp0088336, FBtr0089279
    Conserved Domains (1) summary
    pfam00046
    Location:192244
    Homeobox; Homeobox domain
  2. NM_206440.2NP_996162.1  proboscipedia, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_996162.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P31264
    Related
    FBpp0088335, FBtr0089278
    Conserved Domains (1) summary
    pfam00046
    Location:197249
    Homeobox; Homeobox domain
  3. NM_206441.2NP_996163.1  proboscipedia, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_996163.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P31264
    Related
    FBpp0088334, FBtr0089277
    Conserved Domains (1) summary
    pfam00046
    Location:197249
    Homeobox; Homeobox domain
  4. NM_057321.5NP_476669.3  proboscipedia, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476669.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P31264
    Related
    FBpp0088333, FBtr0089276
    Conserved Domains (2) summary
    COG5576
    Location:168274
    COG5576; Homeodomain-containing transcription factor [Transcription]
    pfam00046
    Location:202254
    Homeobox; Homeobox domain
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