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CCR3 C-C motif chemokine receptor 3 [ Bos taurus (domestic cattle) ]

Gene ID: 408018, updated on 30-Jan-2025
Official Symbol
CCR3provided by VGNC
Official Full Name
C-C motif chemokine receptor 3provided by VGNC
Primary source
VGNC:VGNC:26984
See related
BGD:BT11437; EnsemblRapid:ENSBTAG00070033364
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See CCR3 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (53132554..53166517, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene C-C chemokine receptor type 1-like Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene C-C motif chemokine receptor 1 Neighboring gene nuclear pore complex protein Nup88-like Neighboring gene FYVE and coiled-coil domain autophagy adaptor 1

Genomic Sequence:
NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Construction and application of a bovine immune-endocrine cDNA microarray. Tao W, et al. Vet Immunol Immunopathol, 2004 Sep. PMID 15261689
  2. The bovine chemokine receptors and their mRNA abundance in mononuclear phagocytes. Widdison S, et al. BMC Genomics, 2010 Jul 19. PMID 20642824, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-C chemokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables C-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
C-C chemokine receptor type 3
Names
chemokine (C-C motif) receptor 3

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194960.1 → NP_001181889.1  C-C chemokine receptor type 3

    See identical proteins and their annotated locations for NP_001181889.1

    Status: PROVISIONAL

    Source sequence(s)
    GU936961
    UniProtKB/TrEMBL
    D9ZDE0
    Conserved Domains (1) summary
    pfam00001
    Location:55 → 304
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    53132554..53166517 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005223030.5 → XP_005223087.1  C-C chemokine receptor type 3 isoform X1

    See identical proteins and their annotated locations for XP_005223087.1

    UniProtKB/TrEMBL
    F1MP16
    Related
    ENSBTAP00070045968.1, ENSBTAT00070075336.1
    Conserved Domains (1) summary
    cd15185
    Location:39 → 315
    7tmA_CCR3; CC chemokine receptor type 3, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_005223027.5 → XP_005223084.1  C-C chemokine receptor type 3 isoform X1

    See identical proteins and their annotated locations for XP_005223084.1

    UniProtKB/TrEMBL
    F1MP16
    Related
    ENSBTAP00070045952.1, ENSBTAT00070075316.1
    Conserved Domains (1) summary
    cd15185
    Location:39 → 315
    7tmA_CCR3; CC chemokine receptor type 3, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein Strain
Heading Accession and Version

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