U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rhob ras homolog family member B [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 407883, updated on 9-Dec-2024

Summary

Official Symbol
rhobprovided by Xenbase
Official Full Name
ras homolog family member Bprovided by Xenbase
Primary source
Xenbase:XB-GENE-478301
See related
Ensembl:ENSXETG00000026772 AllianceGenome:Xenbase:XB-GENE-478301
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
arh6; arhb; rhoh6; xrhob
Summary
Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in actin filament organization and signal transduction. Predicted to act upstream of or within small GTPase-mediated signal transduction. Predicted to be active in plasma membrane. Orthologous to human RHOB (ras homolog family member B). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See rhob in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (143342786..143344810)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (139142412..139144436)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene pumilio RNA binding family member 2 Neighboring gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 Neighboring gene HCLS1 binding protein 3 Neighboring gene transfer RNA serine (anticodon AGA)

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC69411

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in actin filament organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
rho-related GTP-binding protein RhoB
Names
ras homolog gene family, member B

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001214.1NP_001001214.1  rho-related GTP-binding protein RhoB

    See identical proteins and their annotated locations for NP_001001214.1

    Status: PROVISIONAL

    Source sequence(s)
    BC067992
    UniProtKB/TrEMBL
    Q6NVL3
    Related
    ENSXETP00000056231.2, ENSXETT00000056231.4
    Conserved Domains (1) summary
    cd01870
    Location:5179
    RhoA_like; Ras homology family A (RhoA)-like includes RhoA, RhoB and RhoC

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    143342786..143344810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)