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KRT5 keratin 5 [ Gallus gallus (chicken) ]

Gene ID: 407779, updated on 23-Sep-2021

Summary

Symbol
KRT5provided by CGNC
Full Name
keratin 5provided by CGNC
Primary source
CGNC:49888
See related
Ensembl:ENSGALG00000032672
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See KRT5 in Genome Data Viewer
Location:
chromosome: 34
Exon count:
9
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 34 NC_052565.1 (2035388..2042261)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 34 NC_052606.1 (1884030..1890892)
104 previous assembly GRCg6a (GCF_000002315.5) 33 NC_008465.4 (5260250..5267112, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 33 NC_008465.3 (1313422..1320284)

Chromosome 34 - NC_052565.1Genomic Context describing neighboring genes Neighboring gene keratin, type II cytoskeletal 75-like 4 Neighboring gene keratin 3 Neighboring gene keratin 6A Neighboring gene uncharacterized LOC112530948 Neighboring gene keratin 75

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
keratin, type II cytoskeletal 5
Names
keratin 5 (epidermolysis bullosa simplex, Dowling-Meara/Kobner/Weber-Cockayne types)
type II alpha-keratin IIA

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001195.3NP_001001195.1  keratin, type II cytoskeletal 5

    See identical proteins and their annotated locations for NP_001001195.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000492
    UniProtKB/TrEMBL
    Q6PVZ5
    Related
    ENSGALP00000055510.1, ENSGALT00000080474.2
    Conserved Domains (3) summary
    pfam00038
    Location:173486
    Filament; Intermediate filament protein
    pfam16208
    Location:140170
    Keratin_2_head; Keratin type II head
    cl01888
    Location:399459
    DUF883; Bacterial protein of unknown function (DUF883)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052565.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2035388..2042261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052606.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1884030..1890892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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