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CCR8 C-C motif chemokine receptor 8 [ Bos taurus (domestic cattle) ]

Gene ID: 407772, updated on 30-Jan-2025
Official Symbol
CCR8provided by VGNC
Official Full Name
C-C motif chemokine receptor 8provided by VGNC
Primary source
VGNC:VGNC:26988
See related
BGD:BT12361; EnsemblRapid:ENSBTAG00070024409
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See CCR8 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (12492456..12636475)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene golgi reassembly stacking protein 1 Neighboring gene tetratricopeptide repeat domain 21A Neighboring gene cysteine and serine rich nuclear protein 1 Neighboring gene xin actin binding repeat containing 1 Neighboring gene C-X3-C motif chemokine receptor 1 Neighboring gene alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6-like Neighboring gene acyl-coenzyme A thioesterase THEM4 Neighboring gene solute carrier family 25 member 38

Genomic Sequence:
NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Construction and application of a bovine immune-endocrine cDNA microarray. Tao W, et al. Vet Immunol Immunopathol, 2004 Sep. PMID 15261689
  2. The bovine chemokine receptors and their mRNA abundance in mononuclear phagocytes. Widdison S, et al. BMC Genomics, 2010 Jul 19. PMID 20642824, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-C chemokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables C-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
C-C chemokine receptor type 8

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194962.1 → NP_001181891.1  C-C chemokine receptor type 8

    See identical proteins and their annotated locations for NP_001181891.1

    Status: PROVISIONAL

    Source sequence(s)
    GU936963
    UniProtKB/TrEMBL
    D9ZDE2
    Related
    ENSBTAP00070033043.1, ENSBTAT00070055111.1
    Conserved Domains (1) summary
    PHA03087
    Location:10 → 314
    PHA03087; G protein-coupled chemokine receptor-like protein; Provisional

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    12492456..12636475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059879479.1 → XP_059735462.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3
    Related
    ENSBTAP00070033076.1, ENSBTAT00070055156.1

  2. XM_059879473.1 → XP_059735456.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3

  3. XM_059879474.1 → XP_059735457.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3

  4. XM_059879472.1 → XP_059735455.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3

  5. XM_059879475.1 → XP_059735458.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3
    Related
    ENSBTAP00070033058.1, ENSBTAT00070055133.1

  6. XM_059879480.1 → XP_059735463.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3

  7. XM_059879478.1 → XP_059735461.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3

  8. XM_059879477.1 → XP_059735460.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3
    Related
    ENSBTAP00070033068.1, ENSBTAT00070055145.1

  9. XM_024982427.2 → XP_024838195.1  C-C chemokine receptor type 8 isoform X1

    UniProtKB/TrEMBL
    F6RDR3
    Conserved Domains (2) summary
    cd14964
    Location:36 → 60
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:34 → 309
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  10. XM_005222375.5 → XP_005222432.1  C-C chemokine receptor type 8 isoform X1

    See identical proteins and their annotated locations for XP_005222432.1

    UniProtKB/TrEMBL
    F6RDR3
    Related
    ENSBTAP00070033054.1, ENSBTAT00070055126.1
    Conserved Domains (2) summary
    cd14964
    Location:36 → 60
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:34 → 309
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

RNA

  1. XR_009492259.1 RNA Sequence

  2. XR_003031867.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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