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Kb23 type II keratin 23 [ Rattus norvegicus (Norway rat) ]

Gene ID: 407759, updated on 31-Dec-2016
Official Symbol
Kb23provided by RGD
Official Full Name
type II keratin 23provided by RGD
Primary source
RGD:1303024
See related
Ensembl:ENSRNOG00000030814 Vega:OTTRNOG00000001642
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Summary
member of the keratin gene family; type II keratins are basic proteins that heterodimerize with type I keratins in the formation of hair and nails [RGD, Feb 2006]
Location:
7q36
Exon count:
10
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (143134980..143141659, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 7 NC_005106.3 (140935551..140942097, complement)

Chromosome 7 - NC_005106.4Genomic Context describing neighboring genes Neighboring gene keratin 81 Neighboring gene keratin 86 Neighboring gene keratin 85 Neighboring gene keratin 84

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
structural constituent of cytoskeleton TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 
intermediate filament-based process TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
intermediate filament TAS
Traceable Author Statement
more info
PubMed 
keratin filament TAS
Traceable Author Statement
more info
PubMed 
Preferred Names
type II keratin 23
Names
type II keratin Kb23

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008813.1NP_001008813.1  type II keratin 23

    See identical proteins and their annotated locations for NP_001008813.1

    Status: PROVISIONAL

    Source sequence(s)
    BK003977
    UniProtKB/TrEMBL
    Q6IG08
    Related
    ENSRNOP00000075208, ENSRNOT00000077207
    Conserved Domains (4) summary
    pfam00038
    Location:103414
    Filament; Intermediate filament protein
    pfam16208
    Location:4100
    Keratin_2_head; Keratin type II head
    cl09111
    Location:223354
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    cl23720
    Location:313381
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005106.4 Reference Rnor_6.0 Primary Assembly

    Range
    143134980..143141659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006242350.3XP_006242412.1  

    See identical proteins and their annotated locations for XP_006242412.1

    UniProtKB/TrEMBL
    A7M776
    Related
    ENSRNOP00000059981, OTTRNOP00000001493, ENSRNOT00000068505, OTTRNOT00000002584
    Conserved Domains (4) summary
    pfam00038
    Location:103414
    Filament; Intermediate filament protein
    pfam16208
    Location:4100
    Keratin_2_head; Keratin type II head
    cl09111
    Location:223354
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    cl23720
    Location:313381
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

Alternate Rn_Celera

Genomic

  1. AC_000075.1 Alternate Rn_Celera

    Range
    129067226..129073737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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