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anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [ Danio rerio (zebrafish) ]

Gene ID: 406562, updated on 3-Oct-2019

Summary

Official Symbol
anp32eprovided by ZNC
Official Full Name
acidic (leucine-rich) nuclear phosphoprotein 32 family, member Eprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-2448
See related
Ensembl:ENSDARG00000054804
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
zgc:65995; zgc:85827; wu:fb22e03; wu:fc04c12; wu:fc19a08; wu:fc79f04; wu:fi39c10
Orthologs

Genomic context

See anp32e in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (42328442..42341815)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (42759005..42772378)
103 previous assembly Zv9 (GCF_000002035.4) 19 NC_007130.5 (43849161..43862576)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene si:ch211-191i18.2 Neighboring gene cocaine- and amphetamine-regulated transcript 4 Neighboring gene pleckstrin homology domain containing, family O member 1a Neighboring gene vacuolar protein sorting 45 homolog

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Clone Names

  • MGC113940

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
histone binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
histone binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
chromatin organization IEA
Inferred from Electronic Annotation
more info
 
histone exchange ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
Swr1 complex ISS
Inferred from Sequence or Structural Similarity
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
acidic leucine-rich nuclear phosphoprotein 32 family member E

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_213277.1NP_998442.1  acidic leucine-rich nuclear phosphoprotein 32 family member E

    See identical proteins and their annotated locations for NP_998442.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068403
    UniProtKB/Swiss-Prot
    Q6NUW5
    Related
    ENSDARP00000071527.3, ENSDART00000077059.5
    Conserved Domains (3) summary
    sd00031
    Location:4465
    LRR_1; leucine-rich repeat [structural motif]
    pfam12799
    Location:89130
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:64125
    LRR_8; Leucine rich repeat

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    42328442..42341815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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