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ndufa4b NDUFA4 mitochondrial complex associated b [ Danio rerio (zebrafish) ]

Gene ID: 406298, updated on 7-Apr-2025

Summary

Official Symbol
ndufa4bprovided by ZNC
Official Full Name
NDUFA4 mitochondrial complex associated bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1962
See related
Ensembl:ENSDARG00000056108 AllianceGenome:ZFIN:ZDB-GENE-040426-1962
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
ndufa4; zgc:73405
Summary
Predicted to be located in mitochondrial inner membrane. Predicted to be part of respiratory chain complex IV. Is expressed in several structures, including gut; musculature system; nervous system; neural tube; and pericardial region. Human ortholog(s) of this gene implicated in mitochondrial complex IV deficiency nuclear type 21. Orthologous to human NDUFA4 (NDUFA4 mitochondrial complex associated). [provided by Alliance of Genome Resources, Apr 2025]
Orthologs
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Genomic context

See ndufa4b in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (9880814..9884326)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (9842971..9846483)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene RUN domain containing 3Ab Neighboring gene family with sequence similarity 117 member Ab Neighboring gene nerve growth factor receptor b Neighboring gene solute carrier family 4 member 1b (Diego blood group)

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
part_of respiratory chain complex IV IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of respiratory chain complex IV ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
cytochrome c oxidase subunit NDUFA4
Names
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4
NADH:ubiquinone oxidoreductase subunit A4
NP_998190.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_213025.1NP_998190.1  cytochrome c oxidase subunit NDUFA4

    See identical proteins and their annotated locations for NP_998190.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059706
    UniProtKB/Swiss-Prot
    Q6PBH5
    Related
    ENSDARP00000055018.4, ENSDART00000055019.6
    Conserved Domains (1) summary
    pfam06522
    Location:1279
    B12D; NADH-ubiquinone reductase complex 1 MLRQ subunit

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    9880814..9884326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394832.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    104108..107620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)