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mttp microsomal triglyceride transfer protein [ Danio rerio (zebrafish) ]

Gene ID: 406207, updated on 7-Apr-2025

Summary

Official Symbol
mttpprovided by ZNC
Official Full Name
microsomal triglyceride transfer proteinprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040419-2
See related
Ensembl:ENSDARG00000008637 AllianceGenome:ZFIN:ZDB-GENE-040419-2
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
mtp; stl; wu:fd36b01; zgc:111876; zgc:136353
Summary
Enables lipid transfer activity. Involved in lipoprotein transport. Acts upstream of or within several processes, including fatty acid transport; lipoprotein biosynthetic process; and sprouting angiogenesis. Predicted to be active in Golgi apparatus; basolateral plasma membrane; and endoplasmic reticulum. Is expressed in several structures, including gut; liver; marginal blastomere; testis; and yolk syncytial layer. Human ortholog(s) of this gene implicated in several diseases, including abetalipoproteinemia; familial hypercholesterolemia; hyperinsulinism; metabolic dysfunction-associated steatotic liver disease; and obesity. Orthologous to human MTTP (microsomal triglyceride transfer protein). [provided by Alliance of Genome Resources, Apr 2025]
Annotation information
Annotation category: suggests misassembly
Orthologs
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Genomic context

See mttp in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (12107680..12126648, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (11420880..11440023, complement)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110439783 Neighboring gene xeroderma pigmentosum, complementation group A Neighboring gene serine peptidase inhibitor, Kazal type 4 Neighboring gene UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 
enables lipid transfer activity IDA
Inferred from Direct Assay
more info
PubMed 
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables lipid transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables phosphatidylethanolamine transfer activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables phospholipid transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phospholipid transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cholesterol homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within digestion IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within lipid metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within lipid transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within lipid transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within lipid transport ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
acts_upstream_of_or_within lipoprotein biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in lipoprotein metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in lipoprotein transport IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within long-chain fatty acid transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within medium-chain fatty acid transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in plasma lipoprotein particle assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in protein secretion ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within sprouting angiogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi apparatus ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in basolateral plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
microsomal triglyceride transfer protein large subunit
Names
stalactite

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_212970.2NP_998135.2  microsomal triglyceride transfer protein large subunit precursor

    Status: VALIDATED

    Source sequence(s)
    BX908747, CABZ01049941, CABZ01050432, CU914777, FO704847
    UniProtKB/Swiss-Prot
    A0A0R4IVV0, A4IGB9, Q8AXV7
    Related
    ENSDARP00000024667.9, ENSDART00000015251.9
    Conserved Domains (2) summary
    pfam09172
    Location:703811
    DUF1943; Domain of unknown function (DUF1943)
    cl26969
    Location:26578
    Vitellogenin_N; Lipoprotein amino terminal region

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    12107680..12126648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)