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SCGB1D4 secretoglobin family 1D member 4 [ Homo sapiens (human) ]

Gene ID: 404552, updated on 23-Nov-2021

Summary

Official Symbol
SCGB1D4provided by HGNC
Official Full Name
secretoglobin family 1D member 4provided by HGNC
Primary source
HGNC:HGNC:31748
See related
Ensembl:ENSG00000197745 MIM:615062
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IIS
Expression
Restricted expression toward endometrium (RPKM 2.2) See more
Orthologs
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Genomic context

See SCGB1D4 in Genome Data Viewer
Location:
11q12.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (62296281..62299075, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (62063753..62066547, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene secretoglobin family 1D member 2 Neighboring gene secretoglobin family 2A member 2 Neighboring gene nucleophosmin 1 pseudogene 35 Neighboring gene asparaginase and isoaspartyl peptidase 1 Neighboring gene regulator of chromosome condensation 2 pseudogene 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
secretoglobin family 1D member 4
Names
IFN-gamma inducible SCGB (IIS)
IFN-gamma-inducible secretoglobin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_206998.2NP_996881.1  secretoglobin family 1D member 4 precursor

    See identical proteins and their annotated locations for NP_996881.1

    Status: VALIDATED

    Source sequence(s)
    AP003306, AY359052
    Consensus CDS
    CCDS31583.1
    UniProtKB/Swiss-Prot
    Q6XE38
    Related
    ENSP00000351395.1, ENST00000358585.3
    Conserved Domains (1) summary
    pfam01099
    Location:2479
    Uteroglobin; Uteroglobin family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    62296281..62299075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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