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CTXN1 cortexin 1 [ Homo sapiens (human) ]

Gene ID: 404217, updated on 23-Nov-2021

Summary

Official Symbol
CTXN1provided by HGNC
Official Full Name
cortexin 1provided by HGNC
Primary source
HGNC:HGNC:31108
See related
Ensembl:ENSG00000178531 MIM:600135
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CTXN
Expression
Biased expression in brain (RPKM 30.2), endometrium (RPKM 9.4) and 3 other tissues See more
Orthologs
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Genomic context

See CTXN1 in Genome Data Viewer
Location:
19p13.2
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (7924491..7926135, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (7989376..7991020, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene transforming growth factor beta receptor 3 like Neighboring gene small nuclear RNA activating complex polypeptide 2 Neighboring gene translocase of inner mitochondrial membrane 44 Neighboring gene ELAV like RNA binding protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ25968

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_206833.4NP_996664.1  cortexin-1

    See identical proteins and their annotated locations for NP_996664.1

    Status: VALIDATED

    Source sequence(s)
    AC010336, BC024148, BC062702
    Consensus CDS
    CCDS12191.1
    UniProtKB/Swiss-Prot
    P60606
    Related
    ENSP00000313226.3, ENST00000318978.6
    Conserved Domains (1) summary
    pfam11057
    Location:1082
    Cortexin; Cortexin of kidney

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    7924491..7926135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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