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WDFY3-AS2 WDFY3 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 404201, updated on 4-Mar-2025
Official Symbol
WDFY3-AS2provided by HGNC
Official Full Name
WDFY3 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:21603
See related
Ensembl:ENSG00000180769 AllianceGenome:HGNC:21603
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FBI4; C4orf12; NCRNA00247
Expression
Broad expression in kidney (RPKM 6.9), brain (RPKM 4.7) and 17 other tissues See more
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See WDFY3-AS2 in Genome Data Viewer
Location:
4q21.23
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (84965616..85008743)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (88295634..88338762)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (85886769..85929896)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene WD repeat and FYVE domain containing 3 Neighboring gene WDFY3 antisense RNA 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:85777520-85778150 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:85791021-85791555 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:85791556-85792089 Neighboring gene RNA, U6 small nuclear 469, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:85848560-85849074 Neighboring gene RN7SK pseudogene 48 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:86087809-86088309 Neighboring gene quinone oxidoreductase-like protein 2 pseudogene

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Markers

Other Names

  • WDFY3 antisense RNA 2 (non-protein coding)

Clone Names

  • MGC120078, MGC120079

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015359.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652490.3
  2. NR_152771.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652207.2
  3. NR_152772.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652474.2
  4. NR_152773.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000650984.1
  5. NR_152774.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000651773.2
  6. NR_152775.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
  7. NR_152776.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021, AY250185, BC019264, BC033127, BX104489, DA127567
  8. NR_152778.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000318186.8
  9. NR_152779.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652312.2
  10. NR_152780.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652652.2
  11. NR_152781.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000651209.1
  12. NR_152782.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652610.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    84965616..85008743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    88295634..88338762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_205857.1: Suppressed sequence

    Description
    NM_205857.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate and encodes a protein of 99 amino acids that lacks homolog support.