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WDFY3-AS2 WDFY3 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 404201, updated on 11-Jun-2021

Summary

Official Symbol
WDFY3-AS2provided by HGNC
Official Full Name
WDFY3 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:21603
See related
Ensembl:ENSG00000180769
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FBI4; C4orf12; NCRNA00247
Expression
Broad expression in kidney (RPKM 6.9), brain (RPKM 4.7) and 17 other tissues See more
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Genomic context

See WDFY3-AS2 in Genome Data Viewer
Location:
4q21.23
Exon count:
8
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (84965616..85008743)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (85886769..85929896)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene WD repeat and FYVE domain containing 3 Neighboring gene WDFY3 antisense RNA 1 Neighboring gene RNA, U6 small nuclear 469, pseudogene Neighboring gene RN7SK pseudogene 48 Neighboring gene quinone oxidoreductase-like protein 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • WDFY3 antisense RNA 2 (non-protein coding)

Clone Names

  • MGC120078, MGC120079

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015359.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652490.2
  2. NR_152771.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652207.2
  3. NR_152772.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652474.2
  4. NR_152773.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000650984.1
  5. NR_152774.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000651773.2
  6. NR_152775.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
  7. NR_152776.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021, AY250185, BC019264, BC033127, BX104489, DA127567
  8. NR_152778.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000318186.8
  9. NR_152779.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652312.2
  10. NR_152780.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652652.2
  11. NR_152781.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000651209.1
  12. NR_152782.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108021
    Related
    ENST00000652610.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    84965616..85008743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_205857.1: Suppressed sequence

    Description
    NM_205857.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate and encodes a protein of 99 amino acids that lacks homolog support.
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