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TSHB thyroid stimulating hormone subunit beta [ Canis lupus familiaris (dog) ]

Gene ID: 403973, updated on 5-Mar-2024

Summary

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Official Symbol
TSHBprovided by VGNC
Official Full Name
thyroid stimulating hormone subunit betaprovided by VGNC
Primary source
VGNC:VGNC:47901
See related
Ensembl:ENSCAFG00845027709
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (53525777..53563370)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (52306371..52332583)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (53186781..53212984)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (52571137..52597347)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (52616291..52641625)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene bile acid receptor-like Neighboring gene uncharacterized LOC119869678 Neighboring gene synaptonemal complex protein 1 Neighboring gene 60S ribosomal protein L36a-like Neighboring gene tetraspanin 2 Neighboring gene uncharacterized LOC119869755 Neighboring gene uncharacterized LOC111090445

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyrotropin subunit beta
Names
TSH-B
TSH-beta
thyroid stimulating hormone beta
thyrotropin beta chain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003290.2 → NP_001003290.1  thyrotropin subunit beta precursor

    See identical proteins and their annotated locations for NP_001003290.1

    Status: VALIDATED

    Source sequence(s)
    CF409774, CF409775
    UniProtKB/Swiss-Prot
    P54828
    UniProtKB/TrEMBL
    A0A0F7RQI2, A0A8C0L8G0
    Conserved Domains (1) summary
    smart00068
    Location:18 → 126
    GHB; Glycoprotein hormone beta chain homologues

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    53525777..53563370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038690461.1 → XP_038546389.1  thyrotropin subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A0F7RQI2, A0A8C0L8G0, A0A8C0S8J0, A0A8I3Q1X1
    Related
    ENSCAFP00845038341.1, ENSCAFT00845048873.1
    Conserved Domains (1) summary
    smart00068
    Location:38 → 146
    GHB; Glycoprotein hormone beta chain homologues

  2. XM_038690463.1 → XP_038546391.1  thyrotropin subunit beta isoform X2

    UniProtKB/Swiss-Prot
    P54828
    UniProtKB/TrEMBL
    A0A0F7RQI2, A0A8C0L8G0
    Conserved Domains (1) summary
    smart00068
    Location:18 → 126
    GHB; Glycoprotein hormone beta chain homologues

  3. XM_038690462.1 → XP_038546390.1  thyrotropin subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A0F7RQI2, A0A8C0L8G0, A0A8C0S8J0, A0A8I3Q1X1
    Conserved Domains (1) summary
    smart00068
    Location:38 → 146
    GHB; Glycoprotein hormone beta chain homologues

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    52571137..52597347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    52616291..52641625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    53186781..53212984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    52306371..52332583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54828.1 GenPept UniProtKB/Swiss-Prot:P54828

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