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POU1F1 POU class 1 homeobox 1 [ Canis lupus familiaris (dog) ]

Gene ID: 403753, updated on 2-Oct-2018

Summary

Official Symbol
POU1F1provided by VGNC
Official Full Name
POU class 1 homeobox 1provided by VGNC
Primary source
VGNC:VGNC:44824
See related
Ensembl:ENSCAFG00000007781
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
PIT-1
Orthologs

Genomic context

See POU1F1 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
6
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 31 NC_006613.3 (769454..788761)

Chromosome 31 - NC_006613.3Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine receptor 1F Neighboring gene uncharacterized LOC102152058 Neighboring gene uncharacterized LOC111093453 Neighboring gene charged multivesicular body protein 2B Neighboring gene alcohol dehydrogenase class-3 pseudogene

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006613.3 Chromosome 31 Reference CanFam3.1 Primary Assembly

General gene information

Markers

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA-binding transcription factor activity, RNA polymerase II-specific ISS
Inferred from Sequence or Structural Similarity
more info
 
sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
positive regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
pituitary-specific positive transcription factor 1
Names
GHF-1
POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1)
growth hormone factor 1
pituitary specific transcription factor 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006949.1NP_001006950.1  pituitary-specific positive transcription factor 1

    See identical proteins and their annotated locations for NP_001006950.1

    Status: PROVISIONAL

    Source sequence(s)
    AF035585
    UniProtKB/Swiss-Prot
    Q9TTI7
    Related
    ENSCAFP00000011512.2, ENSCAFT00000012423.2
    Conserved Domains (2) summary
    smart00352
    Location:125198
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:217270
    Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006613.3 Reference CanFam3.1 Primary Assembly

    Range
    769454..788761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022413060.1XP_022268768.1  pituitary-specific positive transcription factor 1 isoform X1

    Conserved Domains (2) summary
    pfam00046
    Location:162215
    Homeobox; Homeobox domain
    cl22952
    Location:125154
    Pou; Pou domain - N-terminal to homeobox domain
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