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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051806.1 Reference ROS_Cfam_1.0
- Range
-
61016206..61041216 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038659327.1 → XP_038515255.1 72 kDa type IV collagenase
- Related
- ENSCAFP00845001159.1, ENSCAFT00845001478.1
- Conserved Domains (4) summary
-
- smart00059
Location:208 → 256
- FN2; Fibronectin type 2 domain
- cd00094
Location:390 → 584
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:42 → 370
- Peptidase_M10; Matrixin
- pfam01471
Location:1 → 21
- PG_binding_1; Putative peptidoglycan binding domain
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049262.1 Alternate UMICH_Zoey_3.1
- Range
-
57844808..57869825 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038470198.1 → XP_038326126.1 72 kDa type IV collagenase
- Conserved Domains (4) summary
-
- smart00059
Location:208 → 256
- FN2; Fibronectin type 2 domain
- cd00094
Location:390 → 584
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:42 → 370
- Peptidase_M10; Matrixin
- pfam01471
Location:1 → 21
- PG_binding_1; Putative peptidoglycan binding domain
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049743.1 Alternate UNSW_CanFamBas_1.0
- Range
-
58869067..58894067 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038595239.1 → XP_038451167.1 72 kDa type IV collagenase
- Conserved Domains (4) summary
-
- smart00059
Location:208 → 256
- FN2; Fibronectin type 2 domain
- cd00094
Location:390 → 584
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:42 → 370
- Peptidase_M10; Matrixin
- pfam01471
Location:1 → 21
- PG_binding_1; Putative peptidoglycan binding domain
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049223.1 Alternate UU_Cfam_GSD_1.0
- Range
-
59747357..59772363 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038531020.1 → XP_038386948.1 72 kDa type IV collagenase
- Conserved Domains (4) summary
-
- smart00059
Location:208 → 256
- FN2; Fibronectin type 2 domain
- cd00094
Location:390 → 584
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:42 → 370
- Peptidase_M10; Matrixin
- pfam01471
Location:1 → 21
- PG_binding_1; Putative peptidoglycan binding domain
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
57105772..57130788 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038460951.1 → XP_038316879.1 72 kDa type IV collagenase
- Conserved Domains (4) summary
-
- smart00059
Location:208 → 256
- FN2; Fibronectin type 2 domain
- cd00094
Location:390 → 584
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:42 → 370
- Peptidase_M10; Matrixin
- pfam01471
Location:1 → 21
- PG_binding_1; Putative peptidoglycan binding domain