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RPS11 ribosomal protein S11 [ Canis lupus familiaris (dog) ]

Gene ID: 403684, updated on 12-Jan-2021

Summary

Official Symbol
RPS11provided by VGNC
Official Full Name
ribosomal protein S11provided by VGNC
Primary source
VGNC:VGNC:53968
See related
Ensembl:ENSCAFG00000003631
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See RPS11 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (107520326..107523118, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (106583541..106586333, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (107676550..107679342, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (107193377..107196169, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (106835539..106838333, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 1 NC_006583.3 (107000265..107003057, complement)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene Fc fragment of IgG receptor and transporter Neighboring gene microRNA mir-150 Neighboring gene small nucleolar RNA SNORD35 Neighboring gene small nucleolar RNA SNORD35 Neighboring gene small nucleolar RNA SNORD34 Neighboring gene ribosomal protein L13a

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
rRNA binding IEA
Inferred from Electronic Annotation
more info
 
structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
ribosome IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001313783.1NP_001300712.1  40S ribosomal protein S11

    Status: PROVISIONAL

    Source sequence(s)
    AAEX03000800
    UniProtKB/TrEMBL
    F2Z4N5
    Related
    ENSCAFP00000033307.2, ENSCAFT00000022721.4
    Conserved Domains (1) summary
    PTZ00241
    Location:1158
    PTZ00241; 40S ribosomal protein S11; Provisional

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    107520326..107523118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    107193377..107196169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    106835539..106838333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    107676550..107679342 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    106583541..106586333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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