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AP3B1 adaptor related protein complex 3 subunit beta 1 [ Canis lupus familiaris (dog) ]

Gene ID: 403459, updated on 1-Mar-2025
Official Symbol
AP3B1provided by VGNC
Official Full Name
adaptor related protein complex 3 subunit beta 1provided by VGNC
Primary source
VGNC:VGNC:37963
See related
Ensembl:ENSCAFG00845008344 RGD:12137585
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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See AP3B1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
32
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (28405848..28672345)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (29722995..29988777)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (28647884..28914348)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (28341769..28607713)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (28320012..28585750)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene secretory carrier membrane protein 1 Neighboring gene uncharacterized LOC106558577 Neighboring gene uncharacterized LOC111095167 Neighboring gene uncharacterized LOC111095353

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Light-activated BioID - an optically activated proximity labeling system to study protein-protein interactions. Shafraz O, et al. J Cell Sci, 2023 Oct 1. PMID 37756605, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
AP-3 complex subunit beta-1
Names
adapter-related protein complex 3 subunit beta-1
adaptor protein complex AP-3 beta-1 subunit
adaptor protein complex AP-3 subunit beta-1
adaptor related protein complex 3 beta 1 subunit
adaptor-related protein complex AP3 beta 1 subunit
beta-3A-adaptin
beta3A-adaptin
clathrin assembly protein complex 3 beta-1 large chain

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002974.2 → NP_001002974.1  AP-3 complex subunit beta-1

    See identical proteins and their annotated locations for NP_001002974.1

    Status: PROVISIONAL

    Source sequence(s)
    AY221640
    UniProtKB/Swiss-Prot
    Q7YRF1
    UniProtKB/TrEMBL
    A0A8C0RUP0
    Related
    ENSCAFP00845011565.1, ENSCAFT00845014918.1
    Conserved Domains (5) summary
    pfam01602
    Location:46 → 585
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:128 → 251
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:811 → 955
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    pfam14797
    Location:673 → 757
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    sd00044
    Location:116 → 144
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    28405848..28672345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038660423.1 → XP_038516351.1  AP-3 complex subunit beta-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PLK8
    Conserved Domains (4) summary
    sd00044
    Location:116 → 144
    HEAT; HEAT repeat [structural motif]
    pfam14797
    Location:724 → 779
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    pfam01602
    Location:46 → 581
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:810 → 856
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  2. XM_038660421.1 → XP_038516349.1  AP-3 complex subunit beta-1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0PLK8
    Conserved Domains (4) summary
    sd00044
    Location:116 → 144
    HEAT; HEAT repeat [structural motif]
    pfam14797
    Location:724 → 779
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    pfam01602
    Location:46 → 581
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:810 → 955
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  3. XM_038660422.1 → XP_038516350.1  AP-3 complex subunit beta-1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0PLK8
    Conserved Domains (4) summary
    sd00044
    Location:116 → 144
    HEAT; HEAT repeat [structural motif]
    pfam14797
    Location:724 → 779
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    pfam01602
    Location:46 → 581
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:810 → 955
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  4. XM_038660419.1 → XP_038516347.1  AP-3 complex subunit beta-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RUK5, A0A8P0NWU2
    Conserved Domains (4) summary
    sd00044
    Location:91 → 119
    HEAT; HEAT repeat [structural motif]
    pfam14797
    Location:699 → 754
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    pfam01602
    Location:46 → 556
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:785 → 930
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  5. XM_038660418.1 → XP_038516346.1  AP-3 complex subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PKJ8, A0A8C0RUP0, A0A8I3N8P6
    Related
    ENSCAFP00845011401.1, ENSCAFT00845014714.1
    Conserved Domains (4) summary
    sd00044
    Location:116 → 144
    HEAT; HEAT repeat [structural motif]
    pfam14797
    Location:723 → 778
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    pfam01602
    Location:46 → 581
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:809 → 954
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  6. XM_038660420.1 → XP_038516348.1  AP-3 complex subunit beta-1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RUP0
    Conserved Domains (4) summary
    sd00044
    Location:89 → 117
    HEAT; HEAT repeat [structural motif]
    pfam14797
    Location:697 → 752
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    pfam01602
    Location:19 → 554
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:783 → 928
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

RNA

  1. XR_005423843.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    28341769..28607713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    28320012..28585750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    28647884..28914348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    29722995..29988777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7YRF1.1 GenPept UniProtKB/Swiss-Prot:Q7YRF1

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