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SERTM2 serine rich and transmembrane domain containing 2 [ Homo sapiens (human) ]

Gene ID: 401613, updated on 12-Oct-2019

Summary

Official Symbol
SERTM2provided by HGNC
Official Full Name
serine rich and transmembrane domain containing 2provided by HGNC
Primary source
HGNC:HGNC:48576
See related
Ensembl:ENSG00000260802
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00890; DKFZp686D0853
Expression
Biased expression in endometrium (RPKM 22.3), prostate (RPKM 6.6) and 1 other tissue See more
Orthologs

Genomic context

See SERTM2 in Genome Data Viewer
Location:
Xq23
Exon count:
3
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (111511645..111522399)
105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (110754890..110765627)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 496, pseudogene Neighboring gene high mobility group box 1 pseudogene 12 Neighboring gene ribosomal protein L18a pseudogene 15 Neighboring gene eukaryotic translation initiation factor 4B pseudogene 7

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
serine-rich and transmembrane domain-containing 2
Names
long intergenic non-protein coding RNA 890

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001354473.2NP_001341402.1  serine-rich and transmembrane domain-containing 2

    Status: VALIDATED

    Source sequence(s)
    AA429445, AL035067, BX537697, BY994992, DR005240
    Related
    ENSP00000490917.1, ENST00000569275.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    111511645..111522399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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