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LCNL1 lipocalin like 1 [ Homo sapiens (human) ]

Gene ID: 401562, updated on 3-Sep-2017
Official Symbol
LCNL1provided by HGNC
Official Full Name
lipocalin like 1provided by HGNC
Primary source
HGNC:HGNC:34436
See related
Ensembl:ENSG00000214402 Vega:OTTHUMG00000159546
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 5.4), brain (RPKM 2.5) and 8 other tissues See more
Orthologs
Location:
9q34.3
Exon count:
3
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 9 NC_000009.12 (136982993..136985758)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (139877445..139880210)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene proline rich 31 Neighboring gene prostaglandin D2 synthase Neighboring gene PAXX, non-homologous end joining factor Neighboring gene chloride intracellular channel 3

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_207510.3NP_997393.3  lipocalin-like 1 protein

    See identical proteins and their annotated locations for NP_997393.3

    Status: VALIDATED

    Source sequence(s)
    AL807752, BC062468
    Consensus CDS
    CCDS43908.1
    UniProtKB/Swiss-Prot
    Q6ZST4
    Related
    ENSP00000386162.2, OTTHUMP00000215782, ENST00000408973.2, OTTHUMT00000356128
    Conserved Domains (1) summary
    pfam00061
    Location:1104
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p7 Primary Assembly

    Range
    136982993..136985758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018920.2 Alternate CHM1_1.1

    Range
    140026203..140028968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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