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HTATSF1P2 HIV-1 Tat specific factor 1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 401233, updated on 13-May-2022

Summary

Official Symbol
HTATSF1P2provided by HGNC
Official Full Name
HIV-1 Tat specific factor 1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:38586
See related
AllianceGenome:HGNC:38586
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See HTATSF1P2 in Genome Data Viewer
Location:
6p25.2
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (3018959..3023890, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (2887861..2892792, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (3019193..3024124, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene SERPINB6-LINC01011 intergenic CAGE-defined mid-level expression enhancer Neighboring gene long intergenic non-protein coding RNA 1011 Neighboring gene N-ribosyldihydronicotinamide:quinone reductase 2 Neighboring gene uncharacterized LOC101927759 Neighboring gene Sharpr-MPRA regulatory region 12329 Neighboring gene family with sequence similarity 136 member B, pseudogene

Genomic regions, transcripts, and products

General gene information

Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033884.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL133351

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    3018959..3023890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    2887861..2892792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_030001.1: Suppressed sequence

    Description
    NG_030001.1: This RefSeq was permanently suppressed because there is isufficient evidence that this locus is transcribed.
  2. NM_001013680.1: Suppressed sequence

    Description
    NM_001013680.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.