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TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene [ Homo sapiens (human) ]

Gene ID: 401136, updated on 23-Nov-2021

Summary

Official Symbol
TMPRSS11BNLprovided by HGNC
Official Full Name
TMPRSS11B N-terminal like, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:37262
See related
Ensembl:ENSG00000250026
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward esophagus (RPKM 6.7) See more
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Genomic context

See TMPRSS11BNL in Genome Data Viewer
Location:
4q13.2
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (68184129..68218080, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (69049847..69083798, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene transmembrane serine protease 11F Neighboring gene uncharacterized LOC550113 Neighboring gene solute carrier family 47 member 2 pseudogene Neighboring gene synaptotagmin 14 pseudogene 1 Neighboring gene ferritin light chain pseudogene 10 Neighboring gene transmembrane serine protease 11B Neighboring gene UDP glucuronosyltransferase family 2 member B11 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • TMPRSS11B N terminal-like
  • TMPRSS11B N-terminus-like protein
  • transmembrane protease serine 11B-like protein
  • transmembrane protease, serine 11B pseudogene

Clone Names

  • FLJ41562

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104048.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC098799
    Related
    ENST00000514295.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    68184129..68218080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_025118.1: Suppressed sequence

    Description
    NG_025118.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
  2. NM_001129907.2: Suppressed sequence

    Description
    NM_001129907.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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